Protein–RNA interactions for Protein: A0A075B625

Trav4d-3, T cell receptor alpha variable 4D-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4d-3A0A075B625 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav4d-3A0A075B625 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav4d-3A0A075B625 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav4d-3A0A075B625 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav4d-3A0A075B625 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav4d-3A0A075B625 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav4d-3A0A075B625 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav4d-3A0A075B625 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav4d-3A0A075B625 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav4d-3A0A075B625 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav4d-3A0A075B625 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav4d-3A0A075B625 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav4d-3A0A075B625 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav4d-3A0A075B625 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav4d-3A0A075B625 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC14.47□□□□□ -0.09
Trav4d-3A0A075B625 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav4d-3A0A075B625 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav4d-3A0A075B625 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav4d-3A0A075B625 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC14.46□□□□□ -0.09
Trav4d-3A0A075B625 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav4d-3A0A075B625 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav4d-3A0A075B625 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav4d-3A0A075B625 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav4d-3A0A075B625 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
Trav4d-3A0A075B625 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav4d-3A0A075B625 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav4d-3A0A075B625 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav4d-3A0A075B625 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav4d-3A0A075B625 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav4d-3A0A075B625 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav4d-3A0A075B625 Gm34220-201ENSMUST00000223001 2709 ntBASIC14.45□□□□□ -0.1
Trav4d-3A0A075B625 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Trav4d-3A0A075B625 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Trav4d-3A0A075B625 Gm24804-201ENSMUST00000174982 85 ntBASIC14.45□□□□□ -0.1
Trav4d-3A0A075B625 Gm37136-201ENSMUST00000194368 194 ntBASIC14.45□□□□□ -0.1
Trav4d-3A0A075B625 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC14.45□□□□□ -0.1
Trav4d-3A0A075B625 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav4d-3A0A075B625 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC14.45□□□□□ -0.1
Trav4d-3A0A075B625 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav4d-3A0A075B625 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav4d-3A0A075B625 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav4d-3A0A075B625 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav4d-3A0A075B625 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav4d-3A0A075B625 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC14.44□□□□□ -0.1
Trav4d-3A0A075B625 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav4d-3A0A075B625 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav4d-3A0A075B625 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav4d-3A0A075B625 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav4d-3A0A075B625 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav4d-3A0A075B625 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav4d-3A0A075B625 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav4d-3A0A075B625 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Trav4d-3A0A075B625 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav4d-3A0A075B625 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Trav4d-3A0A075B625 AC164433.2-201ENSMUST00000226346 1701 ntBASIC14.44□□□□□ -0.1
Trav4d-3A0A075B625 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC14.43□□□□□ -0.1
Trav4d-3A0A075B625 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav4d-3A0A075B625 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav4d-3A0A075B625 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav4d-3A0A075B625 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Trav4d-3A0A075B625 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav4d-3A0A075B625 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC14.43□□□□□ -0.1
Trav4d-3A0A075B625 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav4d-3A0A075B625 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav4d-3A0A075B625 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Trav4d-3A0A075B625 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav4d-3A0A075B625 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav4d-3A0A075B625 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC14.43□□□□□ -0.1
Trav4d-3A0A075B625 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav4d-3A0A075B625 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav4d-3A0A075B625 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Trav4d-3A0A075B625 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav4d-3A0A075B625 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav4d-3A0A075B625 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav4d-3A0A075B625 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav4d-3A0A075B625 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Trav4d-3A0A075B625 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav4d-3A0A075B625 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav4d-3A0A075B625 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Trav4d-3A0A075B625 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav4d-3A0A075B625 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Trav4d-3A0A075B625 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav4d-3A0A075B625 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav4d-3A0A075B625 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav4d-3A0A075B625 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav4d-3A0A075B625 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC14.41□□□□□ -0.1
Trav4d-3A0A075B625 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav4d-3A0A075B625 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav4d-3A0A075B625 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav4d-3A0A075B625 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav4d-3A0A075B625 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Trav4d-3A0A075B625 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav4d-3A0A075B625 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trav4d-3A0A075B625 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC14.41□□□□□ -0.1
Trav4d-3A0A075B625 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav4d-3A0A075B625 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav4d-3A0A075B625 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav4d-3A0A075B625 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Trav4d-3A0A075B625 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav4d-3A0A075B625 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms