Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC15.55■□□□□ 0.08
Trav13d-1A0A075B606 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav13d-1A0A075B606 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC15.54■□□□□ 0.08
Trav13d-1A0A075B606 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav13d-1A0A075B606 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav13d-1A0A075B606 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Trav13d-1A0A075B606 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Trav13d-1A0A075B606 Gm22567-201ENSMUST00000175542 342 ntBASIC15.54■□□□□ 0.08
Trav13d-1A0A075B606 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav13d-1A0A075B606 Gm20634-201ENSMUST00000090779 2956 ntBASIC15.54■□□□□ 0.08
Trav13d-1A0A075B606 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav13d-1A0A075B606 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav13d-1A0A075B606 Gm42501-201ENSMUST00000200220 1026 ntBASIC15.53■□□□□ 0.08
Trav13d-1A0A075B606 Rps24-207ENSMUST00000224568 714 ntBASIC15.53■□□□□ 0.08
Trav13d-1A0A075B606 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav13d-1A0A075B606 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Trav13d-1A0A075B606 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav13d-1A0A075B606 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav13d-1A0A075B606 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav13d-1A0A075B606 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav13d-1A0A075B606 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav13d-1A0A075B606 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
Trav13d-1A0A075B606 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trav13d-1A0A075B606 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav13d-1A0A075B606 Gm18755-201ENSMUST00000218030 1099 ntBASIC15.52■□□□□ 0.08
Trav13d-1A0A075B606 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav13d-1A0A075B606 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Trav13d-1A0A075B606 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Trav13d-1A0A075B606 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC15.52■□□□□ 0.07
Trav13d-1A0A075B606 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
Trav13d-1A0A075B606 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav13d-1A0A075B606 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav13d-1A0A075B606 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav13d-1A0A075B606 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav13d-1A0A075B606 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav13d-1A0A075B606 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav13d-1A0A075B606 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav13d-1A0A075B606 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav13d-1A0A075B606 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Trav13d-1A0A075B606 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav13d-1A0A075B606 Gm10232-201ENSMUST00000089221 720 ntBASIC15.51■□□□□ 0.07
Trav13d-1A0A075B606 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav13d-1A0A075B606 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav13d-1A0A075B606 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav13d-1A0A075B606 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Trav13d-1A0A075B606 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav13d-1A0A075B606 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC15.5■□□□□ 0.07
Trav13d-1A0A075B606 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav13d-1A0A075B606 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Trav13d-1A0A075B606 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav13d-1A0A075B606 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav13d-1A0A075B606 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav13d-1A0A075B606 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav13d-1A0A075B606 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav13d-1A0A075B606 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav13d-1A0A075B606 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav13d-1A0A075B606 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav13d-1A0A075B606 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Trav13d-1A0A075B606 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav13d-1A0A075B606 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC15.49■□□□□ 0.07
Trav13d-1A0A075B606 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav13d-1A0A075B606 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav13d-1A0A075B606 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC15.49■□□□□ 0.07
Trav13d-1A0A075B606 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav13d-1A0A075B606 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav13d-1A0A075B606 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav13d-1A0A075B606 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav13d-1A0A075B606 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav13d-1A0A075B606 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav13d-1A0A075B606 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav13d-1A0A075B606 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Trav13d-1A0A075B606 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav13d-1A0A075B606 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav13d-1A0A075B606 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav13d-1A0A075B606 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav13d-1A0A075B606 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav13d-1A0A075B606 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav13d-1A0A075B606 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav13d-1A0A075B606 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC15.47■□□□□ 0.07
Trav13d-1A0A075B606 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav13d-1A0A075B606 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC15.47■□□□□ 0.07
Trav13d-1A0A075B606 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav13d-1A0A075B606 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav13d-1A0A075B606 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav13d-1A0A075B606 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav13d-1A0A075B606 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC15.47■□□□□ 0.07
Trav13d-1A0A075B606 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav13d-1A0A075B606 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav13d-1A0A075B606 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav13d-1A0A075B606 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC15.47■□□□□ 0.07
Trav13d-1A0A075B606 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav13d-1A0A075B606 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav13d-1A0A075B606 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Trav13d-1A0A075B606 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav13d-1A0A075B606 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav13d-1A0A075B606 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Trav13d-1A0A075B606 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav13d-1A0A075B606 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav13d-1A0A075B606 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav13d-1A0A075B606 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 9.7 ms