Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Upk1aQ9D132 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Upk1aQ9D132 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Upk1aQ9D132 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Upk1aQ9D132 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Upk1aQ9D132 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upk1aQ9D132 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upk1aQ9D132 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.51□□□□□ -0.41
Upk1aQ9D132 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Upk1aQ9D132 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upk1aQ9D132 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upk1aQ9D132 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.51□□□□□ -0.41
Upk1aQ9D132 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upk1aQ9D132 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.51□□□□□ -0.41
Upk1aQ9D132 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upk1aQ9D132 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Upk1aQ9D132 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upk1aQ9D132 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.51□□□□□ -0.41
Upk1aQ9D132 Gm12585-201ENSMUST00000117307 290 ntBASIC12.51□□□□□ -0.41
Upk1aQ9D132 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.51□□□□□ -0.41
Upk1aQ9D132 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Upk1aQ9D132 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Upk1aQ9D132 Gm27321-201ENSMUST00000185021 205 ntBASIC12.51□□□□□ -0.41
Upk1aQ9D132 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Upk1aQ9D132 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Upk1aQ9D132 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC12.51□□□□□ -0.41
Upk1aQ9D132 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upk1aQ9D132 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upk1aQ9D132 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upk1aQ9D132 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Upk1aQ9D132 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upk1aQ9D132 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Upk1aQ9D132 Fgf17-202ENSMUST00000227123 1336 ntBASIC12.51□□□□□ -0.41
Upk1aQ9D132 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upk1aQ9D132 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.51□□□□□ -0.41
Upk1aQ9D132 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upk1aQ9D132 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Upk1aQ9D132 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Upk1aQ9D132 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.51□□□□□ -0.41
Upk1aQ9D132 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Upk1aQ9D132 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upk1aQ9D132 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upk1aQ9D132 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Upk1aQ9D132 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Upk1aQ9D132 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Upk1aQ9D132 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Upk1aQ9D132 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upk1aQ9D132 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upk1aQ9D132 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Upk1aQ9D132 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.5□□□□□ -0.41
Upk1aQ9D132 Daam2-202ENSMUST00000224595 1926 ntBASIC12.5□□□□□ -0.41
Upk1aQ9D132 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Upk1aQ9D132 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Upk1aQ9D132 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Upk1aQ9D132 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Upk1aQ9D132 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upk1aQ9D132 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.5□□□□□ -0.41
Upk1aQ9D132 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upk1aQ9D132 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Upk1aQ9D132 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upk1aQ9D132 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upk1aQ9D132 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upk1aQ9D132 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Upk1aQ9D132 Cd63-ps-201ENSMUST00000145417 875 ntBASIC12.5□□□□□ -0.41
Upk1aQ9D132 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.5□□□□□ -0.41
Upk1aQ9D132 Gm26308-201ENSMUST00000157768 69 ntBASIC12.5□□□□□ -0.41
Upk1aQ9D132 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upk1aQ9D132 Gm27680-201ENSMUST00000184192 160 ntBASIC12.5□□□□□ -0.41
Upk1aQ9D132 Gm44344-201ENSMUST00000200287 129 ntBASIC12.5□□□□□ -0.41
Upk1aQ9D132 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.5□□□□□ -0.41
Upk1aQ9D132 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Upk1aQ9D132 Gm5425-201ENSMUST00000214125 459 ntBASIC12.5□□□□□ -0.41
Upk1aQ9D132 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upk1aQ9D132 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upk1aQ9D132 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upk1aQ9D132 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Upk1aQ9D132 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC12.5□□□□□ -0.41
Upk1aQ9D132 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Upk1aQ9D132 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upk1aQ9D132 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Upk1aQ9D132 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.5□□□□□ -0.41
Upk1aQ9D132 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Upk1aQ9D132 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Upk1aQ9D132 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upk1aQ9D132 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upk1aQ9D132 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upk1aQ9D132 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Upk1aQ9D132 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Upk1aQ9D132 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upk1aQ9D132 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Upk1aQ9D132 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upk1aQ9D132 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upk1aQ9D132 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upk1aQ9D132 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upk1aQ9D132 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upk1aQ9D132 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upk1aQ9D132 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Upk1aQ9D132 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Upk1aQ9D132 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Upk1aQ9D132 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms