Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rpa3Q9CQ71 Mir7221-201ENSMUST00000184009 72 ntBASIC13.97□□□□□ -0.17
Rpa3Q9CQ71 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rpa3Q9CQ71 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC13.97□□□□□ -0.17
Rpa3Q9CQ71 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rpa3Q9CQ71 Gm8463-201ENSMUST00000208573 613 ntBASIC13.97□□□□□ -0.17
Rpa3Q9CQ71 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.97□□□□□ -0.17
Rpa3Q9CQ71 AC134335.2-201ENSMUST00000227660 440 ntBASIC13.97□□□□□ -0.17
Rpa3Q9CQ71 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rpa3Q9CQ71 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rpa3Q9CQ71 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Rpa3Q9CQ71 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rpa3Q9CQ71 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rpa3Q9CQ71 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Rpa3Q9CQ71 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rpa3Q9CQ71 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rpa3Q9CQ71 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rpa3Q9CQ71 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rpa3Q9CQ71 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rpa3Q9CQ71 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rpa3Q9CQ71 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rpa3Q9CQ71 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rpa3Q9CQ71 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rpa3Q9CQ71 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rpa3Q9CQ71 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rpa3Q9CQ71 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rpa3Q9CQ71 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rpa3Q9CQ71 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rpa3Q9CQ71 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Rpa3Q9CQ71 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.96□□□□□ -0.17
Rpa3Q9CQ71 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rpa3Q9CQ71 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rpa3Q9CQ71 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Rpa3Q9CQ71 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rpa3Q9CQ71 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Rpa3Q9CQ71 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC13.96□□□□□ -0.17
Rpa3Q9CQ71 Gm6447-201ENSMUST00000118905 835 ntBASIC13.96□□□□□ -0.17
Rpa3Q9CQ71 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC13.96□□□□□ -0.17
Rpa3Q9CQ71 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC13.96□□□□□ -0.17
Rpa3Q9CQ71 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rpa3Q9CQ71 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Rpa3Q9CQ71 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rpa3Q9CQ71 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rpa3Q9CQ71 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Rpa3Q9CQ71 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rpa3Q9CQ71 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Rpa3Q9CQ71 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.96□□□□□ -0.17
Rpa3Q9CQ71 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Rpa3Q9CQ71 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Rpa3Q9CQ71 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Rpa3Q9CQ71 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Rpa3Q9CQ71 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.96□□□□□ -0.18
Rpa3Q9CQ71 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Rpa3Q9CQ71 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Rpa3Q9CQ71 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Rpa3Q9CQ71 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Rpa3Q9CQ71 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rpa3Q9CQ71 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rpa3Q9CQ71 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rpa3Q9CQ71 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rpa3Q9CQ71 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rpa3Q9CQ71 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Rpa3Q9CQ71 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rpa3Q9CQ71 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rpa3Q9CQ71 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rpa3Q9CQ71 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Rpa3Q9CQ71 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Rpa3Q9CQ71 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rpa3Q9CQ71 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rpa3Q9CQ71 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rpa3Q9CQ71 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rpa3Q9CQ71 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rpa3Q9CQ71 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rpa3Q9CQ71 Gm6161-201ENSMUST00000121942 1102 ntBASIC13.95□□□□□ -0.18
Rpa3Q9CQ71 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Rpa3Q9CQ71 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC13.95□□□□□ -0.18
Rpa3Q9CQ71 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Rpa3Q9CQ71 Gm6254-201ENSMUST00000168178 1072 ntBASIC13.95□□□□□ -0.18
Rpa3Q9CQ71 Gm6153-201ENSMUST00000172004 1058 ntBASIC13.95□□□□□ -0.18
Rpa3Q9CQ71 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Rpa3Q9CQ71 Gm7063-201ENSMUST00000186840 981 ntBASIC13.95□□□□□ -0.18
Rpa3Q9CQ71 Gm5641-202ENSMUST00000198699 1080 ntBASIC13.95□□□□□ -0.18
Rpa3Q9CQ71 Gm18041-201ENSMUST00000218210 618 ntBASIC13.95□□□□□ -0.18
Rpa3Q9CQ71 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC13.95□□□□□ -0.18
Rpa3Q9CQ71 CT030657.3-201ENSMUST00000222707 1200 ntBASIC13.95□□□□□ -0.18
Rpa3Q9CQ71 CT573086.1-201ENSMUST00000227202 1074 ntBASIC13.95□□□□□ -0.18
Rpa3Q9CQ71 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rpa3Q9CQ71 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rpa3Q9CQ71 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rpa3Q9CQ71 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rpa3Q9CQ71 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rpa3Q9CQ71 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rpa3Q9CQ71 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rpa3Q9CQ71 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
Rpa3Q9CQ71 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rpa3Q9CQ71 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rpa3Q9CQ71 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rpa3Q9CQ71 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rpa3Q9CQ71 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rpa3Q9CQ71 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms