Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chd4Q6PDQ2 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Chd4Q6PDQ2 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Chd4Q6PDQ2 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC16.92■□□□□ 0.3
Chd4Q6PDQ2 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Chd4Q6PDQ2 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chd4Q6PDQ2 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chd4Q6PDQ2 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Chd4Q6PDQ2 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chd4Q6PDQ2 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chd4Q6PDQ2 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chd4Q6PDQ2 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chd4Q6PDQ2 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Chd4Q6PDQ2 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC16.91■□□□□ 0.3
Chd4Q6PDQ2 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chd4Q6PDQ2 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chd4Q6PDQ2 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chd4Q6PDQ2 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chd4Q6PDQ2 Gm28450-201ENSMUST00000187349 638 ntBASIC16.91■□□□□ 0.3
Chd4Q6PDQ2 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Chd4Q6PDQ2 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Chd4Q6PDQ2 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chd4Q6PDQ2 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
Chd4Q6PDQ2 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chd4Q6PDQ2 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chd4Q6PDQ2 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chd4Q6PDQ2 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chd4Q6PDQ2 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chd4Q6PDQ2 Gm2673-201ENSMUST00000120958 1608 ntBASIC16.91■□□□□ 0.3
Chd4Q6PDQ2 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chd4Q6PDQ2 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chd4Q6PDQ2 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chd4Q6PDQ2 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chd4Q6PDQ2 Gm12058-201ENSMUST00000118614 437 ntBASIC16.9■□□□□ 0.3
Chd4Q6PDQ2 Gm27023-201ENSMUST00000182372 285 ntBASIC16.9■□□□□ 0.3
Chd4Q6PDQ2 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC16.9■□□□□ 0.3
Chd4Q6PDQ2 Gm10702-201ENSMUST00000098929 1268 ntBASIC16.9■□□□□ 0.3
Chd4Q6PDQ2 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Chd4Q6PDQ2 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Chd4Q6PDQ2 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chd4Q6PDQ2 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chd4Q6PDQ2 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chd4Q6PDQ2 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Chd4Q6PDQ2 Gm45495-201ENSMUST00000200940 1700 ntBASIC16.9■□□□□ 0.3
Chd4Q6PDQ2 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Chd4Q6PDQ2 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Chd4Q6PDQ2 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Chd4Q6PDQ2 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Chd4Q6PDQ2 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Chd4Q6PDQ2 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC16.9■□□□□ 0.3
Chd4Q6PDQ2 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chd4Q6PDQ2 Gm9333-201ENSMUST00000205452 1323 ntBASIC16.9■□□□□ 0.3
Chd4Q6PDQ2 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Chd4Q6PDQ2 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Chd4Q6PDQ2 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Chd4Q6PDQ2 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chd4Q6PDQ2 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chd4Q6PDQ2 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
Chd4Q6PDQ2 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Chd4Q6PDQ2 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chd4Q6PDQ2 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chd4Q6PDQ2 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chd4Q6PDQ2 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chd4Q6PDQ2 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Chd4Q6PDQ2 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Chd4Q6PDQ2 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Chd4Q6PDQ2 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Chd4Q6PDQ2 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Chd4Q6PDQ2 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chd4Q6PDQ2 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chd4Q6PDQ2 Gm8617-201ENSMUST00000118796 2222 ntBASIC16.89■□□□□ 0.29
Chd4Q6PDQ2 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chd4Q6PDQ2 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Chd4Q6PDQ2 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC16.89■□□□□ 0.29
Chd4Q6PDQ2 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC16.89■□□□□ 0.29
Chd4Q6PDQ2 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chd4Q6PDQ2 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC16.89■□□□□ 0.29
Chd4Q6PDQ2 Gm43289-201ENSMUST00000200537 1475 ntBASIC16.89■□□□□ 0.29
Chd4Q6PDQ2 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Chd4Q6PDQ2 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Chd4Q6PDQ2 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chd4Q6PDQ2 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chd4Q6PDQ2 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Chd4Q6PDQ2 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chd4Q6PDQ2 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC16.89■□□□□ 0.29
Chd4Q6PDQ2 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chd4Q6PDQ2 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chd4Q6PDQ2 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chd4Q6PDQ2 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Chd4Q6PDQ2 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chd4Q6PDQ2 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chd4Q6PDQ2 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chd4Q6PDQ2 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chd4Q6PDQ2 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chd4Q6PDQ2 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chd4Q6PDQ2 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Chd4Q6PDQ2 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chd4Q6PDQ2 Gm13813-201ENSMUST00000120998 787 ntBASIC16.88■□□□□ 0.29
Chd4Q6PDQ2 Gm5863-201ENSMUST00000121760 1008 ntBASIC16.88■□□□□ 0.29
Chd4Q6PDQ2 Gm22334-201ENSMUST00000158070 133 ntBASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 94.5 ms