Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.67□□□□□ -0.22
Trim80Q3V061 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Trim80Q3V061 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.66□□□□□ -0.22
Trim80Q3V061 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim80Q3V061 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim80Q3V061 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim80Q3V061 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim80Q3V061 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim80Q3V061 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim80Q3V061 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC13.66□□□□□ -0.22
Trim80Q3V061 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim80Q3V061 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim80Q3V061 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Trim80Q3V061 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim80Q3V061 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.66□□□□□ -0.22
Trim80Q3V061 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim80Q3V061 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim80Q3V061 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim80Q3V061 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim80Q3V061 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim80Q3V061 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim80Q3V061 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim80Q3V061 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim80Q3V061 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim80Q3V061 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim80Q3V061 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim80Q3V061 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim80Q3V061 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Trim80Q3V061 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim80Q3V061 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim80Q3V061 Gm15653-201ENSMUST00000119247 907 ntBASIC13.66□□□□□ -0.22
Trim80Q3V061 Gm15321-201ENSMUST00000121290 288 ntBASIC13.66□□□□□ -0.22
Trim80Q3V061 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Trim80Q3V061 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim80Q3V061 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim80Q3V061 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim80Q3V061 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.66□□□□□ -0.22
Trim80Q3V061 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim80Q3V061 AC121598.1-201ENSMUST00000228224 1019 ntBASIC13.66□□□□□ -0.22
Trim80Q3V061 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Trim80Q3V061 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC13.66□□□□□ -0.22
Trim80Q3V061 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim80Q3V061 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim80Q3V061 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.66□□□□□ -0.22
Trim80Q3V061 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim80Q3V061 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim80Q3V061 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim80Q3V061 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.66□□□□□ -0.22
Trim80Q3V061 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim80Q3V061 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim80Q3V061 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trim80Q3V061 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.65□□□□□ -0.22
Trim80Q3V061 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim80Q3V061 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim80Q3V061 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim80Q3V061 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim80Q3V061 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC13.65□□□□□ -0.22
Trim80Q3V061 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Trim80Q3V061 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Trim80Q3V061 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.65□□□□□ -0.22
Trim80Q3V061 Gm43433-201ENSMUST00000196573 481 ntBASIC13.65□□□□□ -0.22
Trim80Q3V061 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trim80Q3V061 Gm44608-201ENSMUST00000206827 855 ntBASIC13.65□□□□□ -0.22
Trim80Q3V061 AC238811.1-201ENSMUST00000225302 441 ntBASIC13.65□□□□□ -0.22
Trim80Q3V061 AC154239.3-201ENSMUST00000226933 674 ntBASIC13.65□□□□□ -0.22
Trim80Q3V061 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim80Q3V061 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Trim80Q3V061 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim80Q3V061 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trim80Q3V061 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim80Q3V061 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trim80Q3V061 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC13.65□□□□□ -0.22
Trim80Q3V061 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim80Q3V061 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trim80Q3V061 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim80Q3V061 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim80Q3V061 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim80Q3V061 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim80Q3V061 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trim80Q3V061 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim80Q3V061 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC13.65□□□□□ -0.22
Trim80Q3V061 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim80Q3V061 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
Trim80Q3V061 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC13.64□□□□□ -0.23
Trim80Q3V061 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim80Q3V061 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim80Q3V061 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim80Q3V061 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim80Q3V061 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim80Q3V061 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim80Q3V061 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim80Q3V061 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.64□□□□□ -0.23
Trim80Q3V061 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim80Q3V061 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Trim80Q3V061 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim80Q3V061 Gm4204-201ENSMUST00000110798 1231 ntBASIC13.64□□□□□ -0.23
Trim80Q3V061 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC13.64□□□□□ -0.23
Trim80Q3V061 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.64□□□□□ -0.23
Trim80Q3V061 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim80Q3V061 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms