Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
NcanP55066 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
NcanP55066 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NcanP55066 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NcanP55066 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NcanP55066 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
NcanP55066 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NcanP55066 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
NcanP55066 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NcanP55066 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
NcanP55066 Gm15515-201ENSMUST00000117827 822 ntBASIC13.8□□□□□ -0.2
NcanP55066 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC13.8□□□□□ -0.2
NcanP55066 Gm12969-201ENSMUST00000120199 1004 ntBASIC13.8□□□□□ -0.2
NcanP55066 Gm11450-201ENSMUST00000121144 333 ntBASIC13.8□□□□□ -0.2
NcanP55066 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC13.8□□□□□ -0.2
NcanP55066 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.8□□□□□ -0.2
NcanP55066 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NcanP55066 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NcanP55066 Gm23218-201ENSMUST00000158124 276 ntBASIC13.8□□□□□ -0.2
NcanP55066 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC13.8□□□□□ -0.2
NcanP55066 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC13.8□□□□□ -0.2
NcanP55066 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC13.8□□□□□ -0.2
NcanP55066 Gm43916-201ENSMUST00000205062 967 ntBASIC13.8□□□□□ -0.2
NcanP55066 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
NcanP55066 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
NcanP55066 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NcanP55066 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NcanP55066 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NcanP55066 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NcanP55066 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
NcanP55066 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NcanP55066 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NcanP55066 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NcanP55066 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
NcanP55066 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NcanP55066 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
NcanP55066 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NcanP55066 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
NcanP55066 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NcanP55066 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
NcanP55066 Gm2673-201ENSMUST00000120958 1608 ntBASIC13.79□□□□□ -0.2
NcanP55066 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
NcanP55066 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NcanP55066 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NcanP55066 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NcanP55066 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
NcanP55066 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
NcanP55066 Gm43598-201ENSMUST00000202482 2479 ntBASIC13.79□□□□□ -0.2
NcanP55066 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NcanP55066 Gm12165-201ENSMUST00000117047 342 ntBASIC13.79□□□□□ -0.2
NcanP55066 Gm13492-201ENSMUST00000119772 665 ntBASIC13.79□□□□□ -0.2
NcanP55066 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC13.79□□□□□ -0.2
NcanP55066 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC13.79□□□□□ -0.2
NcanP55066 Rmrp-201ENSMUST00000157463 271 ntBASIC13.79□□□□□ -0.2
NcanP55066 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NcanP55066 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC13.79□□□□□ -0.2
NcanP55066 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NcanP55066 Gm19287-201ENSMUST00000203190 358 ntBASIC13.79□□□□□ -0.2
NcanP55066 AL732506.1-201ENSMUST00000226420 281 ntBASIC13.79□□□□□ -0.2
NcanP55066 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NcanP55066 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
NcanP55066 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
NcanP55066 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NcanP55066 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC13.79□□□□□ -0.2
NcanP55066 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NcanP55066 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
NcanP55066 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NcanP55066 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
NcanP55066 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NcanP55066 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
NcanP55066 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NcanP55066 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC13.79□□□□□ -0.2
NcanP55066 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NcanP55066 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NcanP55066 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NcanP55066 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NcanP55066 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC13.79□□□□□ -0.2
NcanP55066 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NcanP55066 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
NcanP55066 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NcanP55066 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NcanP55066 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NcanP55066 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
NcanP55066 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NcanP55066 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NcanP55066 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NcanP55066 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NcanP55066 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NcanP55066 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NcanP55066 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NcanP55066 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NcanP55066 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
NcanP55066 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NcanP55066 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NcanP55066 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
NcanP55066 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NcanP55066 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC13.78□□□□□ -0.2
NcanP55066 Gm6161-201ENSMUST00000121942 1102 ntBASIC13.78□□□□□ -0.2
NcanP55066 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NcanP55066 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms