Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm8894-201ENSMUST00000074642 666 ntBASIC13.43□□□□□ -0.26
Sox1P53783 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox1P53783 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox1P53783 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox1P53783 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC13.43□□□□□ -0.26
Sox1P53783 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sox1P53783 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox1P53783 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sox1P53783 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox1P53783 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sox1P53783 Gm4864-201ENSMUST00000219894 1461 ntBASIC13.42□□□□□ -0.26
Sox1P53783 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.42□□□□□ -0.26
Sox1P53783 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Sox1P53783 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sox1P53783 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox1P53783 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sox1P53783 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Sox1P53783 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sox1P53783 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox1P53783 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox1P53783 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sox1P53783 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox1P53783 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox1P53783 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Sox1P53783 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox1P53783 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.42□□□□□ -0.26
Sox1P53783 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
Sox1P53783 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC13.42□□□□□ -0.26
Sox1P53783 Gm12539-201ENSMUST00000121549 1098 ntBASIC13.42□□□□□ -0.26
Sox1P53783 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox1P53783 Gm6771-201ENSMUST00000182716 1001 ntBASIC13.42□□□□□ -0.26
Sox1P53783 Gm37028-201ENSMUST00000194276 107 ntBASIC13.42□□□□□ -0.26
Sox1P53783 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC13.42□□□□□ -0.26
Sox1P53783 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sox1P53783 Gm17812-201ENSMUST00000204935 318 ntBASIC13.42□□□□□ -0.26
Sox1P53783 Gm45691-201ENSMUST00000206905 1120 ntBASIC13.42□□□□□ -0.26
Sox1P53783 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC13.42□□□□□ -0.26
Sox1P53783 AC122305.4-201ENSMUST00000216159 1206 ntBASIC13.42□□□□□ -0.26
Sox1P53783 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC13.42□□□□□ -0.26
Sox1P53783 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC13.42□□□□□ -0.26
Sox1P53783 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Sox1P53783 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox1P53783 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Sox1P53783 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox1P53783 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox1P53783 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.42□□□□□ -0.26
Sox1P53783 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Sox1P53783 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox1P53783 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox1P53783 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sox1P53783 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox1P53783 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox1P53783 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox1P53783 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox1P53783 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.42□□□□□ -0.26
Sox1P53783 Gm9768-201ENSMUST00000206007 2861 ntBASIC13.42□□□□□ -0.26
Sox1P53783 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox1P53783 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox1P53783 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Sox1P53783 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sox1P53783 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox1P53783 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Sox1P53783 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox1P53783 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox1P53783 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox1P53783 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Sox1P53783 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC13.41□□□□□ -0.26
Sox1P53783 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox1P53783 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox1P53783 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC13.41□□□□□ -0.26
Sox1P53783 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
Sox1P53783 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC13.41□□□□□ -0.26
Sox1P53783 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC13.41□□□□□ -0.26
Sox1P53783 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox1P53783 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sox1P53783 Mir6546-201ENSMUST00000184460 62 ntBASIC13.41□□□□□ -0.26
Sox1P53783 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox1P53783 Gm7902-201ENSMUST00000198842 947 ntBASIC13.41□□□□□ -0.26
Sox1P53783 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.41□□□□□ -0.26
Sox1P53783 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC13.41□□□□□ -0.26
Sox1P53783 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC13.41□□□□□ -0.26
Sox1P53783 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sox1P53783 Gm19640-201ENSMUST00000214849 464 ntBASIC13.41□□□□□ -0.26
Sox1P53783 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC13.41□□□□□ -0.26
Sox1P53783 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox1P53783 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox1P53783 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox1P53783 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox1P53783 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sox1P53783 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC13.41□□□□□ -0.26
Sox1P53783 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sox1P53783 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox1P53783 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox1P53783 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox1P53783 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sox1P53783 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Sox1P53783 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox1P53783 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox1P53783 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sox1P53783 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms