Protein–RNA interactions for Protein: P16388

Kcna1, Potassium voltage-gated channel subfamily A member 1, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcna1P16388 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Kcna1P16388 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Kcna1P16388 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC14.97□□□□□ -0.01
Kcna1P16388 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Kcna1P16388 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Kcna1P16388 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Kcna1P16388 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Kcna1P16388 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Kcna1P16388 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Kcna1P16388 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Kcna1P16388 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Kcna1P16388 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Kcna1P16388 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Kcna1P16388 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Kcna1P16388 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Kcna1P16388 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Kcna1P16388 Gm38346-201ENSMUST00000192379 2639 ntBASIC14.96□□□□□ -0.01
Kcna1P16388 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Kcna1P16388 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Kcna1P16388 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Kcna1P16388 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Kcna1P16388 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Kcna1P16388 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Kcna1P16388 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Kcna1P16388 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC14.96□□□□□ -0.01
Kcna1P16388 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Kcna1P16388 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Kcna1P16388 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Kcna1P16388 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Kcna1P16388 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Kcna1P16388 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Kcna1P16388 Gm12384-201ENSMUST00000119228 919 ntBASIC14.96□□□□□ -0.01
Kcna1P16388 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Kcna1P16388 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC14.96□□□□□ -0.01
Kcna1P16388 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Kcna1P16388 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC14.96□□□□□ -0.01
Kcna1P16388 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Kcna1P16388 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Kcna1P16388 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
Kcna1P16388 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Kcna1P16388 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Kcna1P16388 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Kcna1P16388 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Kcna1P16388 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Kcna1P16388 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Kcna1P16388 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Kcna1P16388 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Kcna1P16388 Gm8706-201ENSMUST00000197372 1491 ntBASIC14.95□□□□□ -0.02
Kcna1P16388 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Kcna1P16388 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Kcna1P16388 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Kcna1P16388 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
Kcna1P16388 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Kcna1P16388 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Kcna1P16388 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Kcna1P16388 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Kcna1P16388 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Kcna1P16388 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Kcna1P16388 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Kcna1P16388 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Kcna1P16388 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Kcna1P16388 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Kcna1P16388 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC14.95□□□□□ -0.02
Kcna1P16388 Tyms-ps-201ENSMUST00000219550 915 ntBASIC14.95□□□□□ -0.02
Kcna1P16388 AC126253.1-201ENSMUST00000227974 824 ntBASIC14.95□□□□□ -0.02
Kcna1P16388 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Kcna1P16388 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Kcna1P16388 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Kcna1P16388 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.95□□□□□ -0.02
Kcna1P16388 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Kcna1P16388 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC14.95□□□□□ -0.02
Kcna1P16388 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Kcna1P16388 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Kcna1P16388 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Kcna1P16388 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Kcna1P16388 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Kcna1P16388 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Kcna1P16388 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Kcna1P16388 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Kcna1P16388 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Kcna1P16388 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
Kcna1P16388 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Kcna1P16388 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Kcna1P16388 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Kcna1P16388 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Kcna1P16388 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Kcna1P16388 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Kcna1P16388 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Kcna1P16388 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Kcna1P16388 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Kcna1P16388 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Kcna1P16388 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
Kcna1P16388 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC14.94□□□□□ -0.02
Kcna1P16388 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC14.94□□□□□ -0.02
Kcna1P16388 AC135669.1-202ENSMUST00000216742 540 ntBASIC14.94□□□□□ -0.02
Kcna1P16388 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Kcna1P16388 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Kcna1P16388 Gm10268-201ENSMUST00000085340 555 ntBASIC14.94□□□□□ -0.02
Kcna1P16388 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Kcna1P16388 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms