Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Chmp6P0C0A3 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp6P0C0A3 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp6P0C0A3 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp6P0C0A3 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp6P0C0A3 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC14.39□□□□□ -0.11
Chmp6P0C0A3 Gm37324-201ENSMUST00000194500 4504 ntBASIC14.39□□□□□ -0.11
Chmp6P0C0A3 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp6P0C0A3 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp6P0C0A3 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC14.39□□□□□ -0.11
Chmp6P0C0A3 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp6P0C0A3 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp6P0C0A3 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp6P0C0A3 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp6P0C0A3 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp6P0C0A3 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp6P0C0A3 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp6P0C0A3 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp6P0C0A3 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp6P0C0A3 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp6P0C0A3 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC14.38□□□□□ -0.11
Chmp6P0C0A3 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Chmp6P0C0A3 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp6P0C0A3 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp6P0C0A3 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Chmp6P0C0A3 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp6P0C0A3 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp6P0C0A3 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp6P0C0A3 Gm12537-201ENSMUST00000119266 1002 ntBASIC14.38□□□□□ -0.11
Chmp6P0C0A3 Gm12070-201ENSMUST00000119551 1002 ntBASIC14.38□□□□□ -0.11
Chmp6P0C0A3 Gm12671-201ENSMUST00000119978 1002 ntBASIC14.38□□□□□ -0.11
Chmp6P0C0A3 Gm13292-201ENSMUST00000120014 1000 ntBASIC14.38□□□□□ -0.11
Chmp6P0C0A3 Gm12403-201ENSMUST00000121384 959 ntBASIC14.38□□□□□ -0.11
Chmp6P0C0A3 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp6P0C0A3 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp6P0C0A3 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC14.38□□□□□ -0.11
Chmp6P0C0A3 Gm10359-201ENSMUST00000180167 1002 ntBASIC14.38□□□□□ -0.11
Chmp6P0C0A3 Gm12033-201ENSMUST00000180654 1002 ntBASIC14.38□□□□□ -0.11
Chmp6P0C0A3 Gm5559-201ENSMUST00000180755 1002 ntBASIC14.38□□□□□ -0.11
Chmp6P0C0A3 Gm4335-201ENSMUST00000182581 1004 ntBASIC14.38□□□□□ -0.11
Chmp6P0C0A3 AC073947.2-201ENSMUST00000215888 1130 ntBASIC14.38□□□□□ -0.11
Chmp6P0C0A3 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp6P0C0A3 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp6P0C0A3 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Chmp6P0C0A3 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp6P0C0A3 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp6P0C0A3 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp6P0C0A3 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Chmp6P0C0A3 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC14.38□□□□□ -0.11
Chmp6P0C0A3 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp6P0C0A3 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Chmp6P0C0A3 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp6P0C0A3 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Chmp6P0C0A3 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp6P0C0A3 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp6P0C0A3 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp6P0C0A3 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp6P0C0A3 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp6P0C0A3 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC14.38□□□□□ -0.11
Chmp6P0C0A3 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp6P0C0A3 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp6P0C0A3 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp6P0C0A3 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp6P0C0A3 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp6P0C0A3 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp6P0C0A3 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp6P0C0A3 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp6P0C0A3 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp6P0C0A3 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp6P0C0A3 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp6P0C0A3 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp6P0C0A3 Gm12960-201ENSMUST00000120017 1066 ntBASIC14.37□□□□□ -0.11
Chmp6P0C0A3 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC14.37□□□□□ -0.11
Chmp6P0C0A3 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
Chmp6P0C0A3 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Chmp6P0C0A3 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp6P0C0A3 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC14.37□□□□□ -0.11
Chmp6P0C0A3 Gm6983-201ENSMUST00000214912 628 ntBASIC14.37□□□□□ -0.11
Chmp6P0C0A3 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp6P0C0A3 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp6P0C0A3 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC14.37□□□□□ -0.11
Chmp6P0C0A3 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC14.37□□□□□ -0.11
Chmp6P0C0A3 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Chmp6P0C0A3 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp6P0C0A3 Gm13730-201ENSMUST00000121036 1462 ntBASIC14.37□□□□□ -0.11
Chmp6P0C0A3 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp6P0C0A3 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp6P0C0A3 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp6P0C0A3 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp6P0C0A3 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp6P0C0A3 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp6P0C0A3 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp6P0C0A3 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp6P0C0A3 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp6P0C0A3 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp6P0C0A3 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Chmp6P0C0A3 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp6P0C0A3 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp6P0C0A3 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp6P0C0A3 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms