Protein–RNA interactions for Protein: M0QWN7

Usp35, Ubiquitin-specific peptidase 35, mousemouse

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp35M0QWN7 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp35M0QWN7 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Usp35M0QWN7 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp35M0QWN7 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp35M0QWN7 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC14.21□□□□□ -0.13
Usp35M0QWN7 Gm14660-201ENSMUST00000119809 575 ntBASIC14.21□□□□□ -0.13
Usp35M0QWN7 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC14.21□□□□□ -0.13
Usp35M0QWN7 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Usp35M0QWN7 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp35M0QWN7 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp35M0QWN7 Gm24196-201ENSMUST00000179161 110 ntBASIC14.21□□□□□ -0.13
Usp35M0QWN7 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC14.21□□□□□ -0.13
Usp35M0QWN7 Gm29127-201ENSMUST00000188304 517 ntBASIC14.21□□□□□ -0.13
Usp35M0QWN7 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Usp35M0QWN7 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC14.21□□□□□ -0.13
Usp35M0QWN7 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC14.21□□□□□ -0.13
Usp35M0QWN7 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp35M0QWN7 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Usp35M0QWN7 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Usp35M0QWN7 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Usp35M0QWN7 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.21□□□□□ -0.13
Usp35M0QWN7 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp35M0QWN7 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp35M0QWN7 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp35M0QWN7 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp35M0QWN7 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp35M0QWN7 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp35M0QWN7 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp35M0QWN7 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp35M0QWN7 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp35M0QWN7 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Usp35M0QWN7 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Usp35M0QWN7 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Usp35M0QWN7 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Usp35M0QWN7 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.14
Usp35M0QWN7 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC14.21□□□□□ -0.14
Usp35M0QWN7 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC14.2□□□□□ -0.14
Usp35M0QWN7 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp35M0QWN7 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Usp35M0QWN7 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp35M0QWN7 Gm9924-202ENSMUST00000192760 2311 ntBASIC14.2□□□□□ -0.14
Usp35M0QWN7 Gm13050-201ENSMUST00000122149 1345 ntBASIC14.2□□□□□ -0.14
Usp35M0QWN7 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp35M0QWN7 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp35M0QWN7 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp35M0QWN7 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp35M0QWN7 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Usp35M0QWN7 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC14.2□□□□□ -0.14
Usp35M0QWN7 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC14.2□□□□□ -0.14
Usp35M0QWN7 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp35M0QWN7 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC14.2□□□□□ -0.14
Usp35M0QWN7 Gm27731-201ENSMUST00000185192 107 ntBASIC14.2□□□□□ -0.14
Usp35M0QWN7 Gm42442-201ENSMUST00000197951 1133 ntBASIC14.2□□□□□ -0.14
Usp35M0QWN7 Gm42550-201ENSMUST00000201553 960 ntBASIC14.2□□□□□ -0.14
Usp35M0QWN7 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC14.2□□□□□ -0.14
Usp35M0QWN7 Gm45331-201ENSMUST00000209868 554 ntBASIC14.2□□□□□ -0.14
Usp35M0QWN7 Gm18473-201ENSMUST00000220543 868 ntBASIC14.2□□□□□ -0.14
Usp35M0QWN7 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp35M0QWN7 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Usp35M0QWN7 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp35M0QWN7 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Usp35M0QWN7 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp35M0QWN7 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Usp35M0QWN7 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp35M0QWN7 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp35M0QWN7 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Usp35M0QWN7 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp35M0QWN7 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
Usp35M0QWN7 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp35M0QWN7 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Usp35M0QWN7 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC14.19□□□□□ -0.14
Usp35M0QWN7 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp35M0QWN7 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp35M0QWN7 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp35M0QWN7 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp35M0QWN7 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Usp35M0QWN7 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp35M0QWN7 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
Usp35M0QWN7 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC14.19□□□□□ -0.14
Usp35M0QWN7 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Usp35M0QWN7 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp35M0QWN7 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Usp35M0QWN7 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Usp35M0QWN7 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Usp35M0QWN7 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Usp35M0QWN7 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp35M0QWN7 Gm2445-201ENSMUST00000182798 989 ntBASIC14.19□□□□□ -0.14
Usp35M0QWN7 Gm9728-201ENSMUST00000200197 1055 ntBASIC14.19□□□□□ -0.14
Usp35M0QWN7 Gm9299-201ENSMUST00000206392 1140 ntBASIC14.19□□□□□ -0.14
Usp35M0QWN7 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC14.19□□□□□ -0.14
Usp35M0QWN7 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Usp35M0QWN7 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Usp35M0QWN7 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp35M0QWN7 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Usp35M0QWN7 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Usp35M0QWN7 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp35M0QWN7 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Usp35M0QWN7 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp35M0QWN7 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp35M0QWN7 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms