Protein–RNA interactions for Protein: A0A1B0GSB3

Gm3880, Predicted pseudogene 3880, mousemouse

Predictions only

Length 72 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3880A0A1B0GSB3 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Gm45266-201ENSMUST00000210111 2173 ntBASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Myo18a-203ENSMUST00000092887 7304 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Gm37931-201ENSMUST00000194686 2866 ntBASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Plpbp-203ENSMUST00000209525 5767 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Svil-204ENSMUST00000127297 6243 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Tmem33-201ENSMUST00000037918 6247 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Slc35b2-207ENSMUST00000226086 850 ntBASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Zfp275-201ENSMUST00000033731 6376 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Tram2-201ENSMUST00000037998 6492 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Hyou1-206ENSMUST00000161318 4489 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Gm5763-201ENSMUST00000155951 1530 ntBASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Limch1-202ENSMUST00000101164 5192 ntAPPRIS P2 TSL 5 BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 AC115735.4-201ENSMUST00000227460 1944 ntBASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 AC126549.2-201ENSMUST00000223997 1976 ntBASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Disp2-201ENSMUST00000037547 6626 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Gpatch8-206ENSMUST00000143842 6871 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Kmt2a-201ENSMUST00000002095 16461 ntAPPRIS P2 TSL 5 BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Gm36987-201ENSMUST00000194704 2979 ntBASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Plekha7-207ENSMUST00000182511 4502 ntTSL 2 BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Ipo7-201ENSMUST00000084731 4763 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Hspa12a-201ENSMUST00000066285 5733 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Phf21a-202ENSMUST00000068702 6023 ntAPPRIS P3 TSL 5 BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Astn1-201ENSMUST00000046110 7195 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Pcdh11x-202ENSMUST00000113358 8607 ntAPPRIS P2 TSL 5 BASIC6.38□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms