Protein–RNA interactions for Protein: Q9WVL1

Ap4s1, AP-4 complex subunit sigma-1, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ap4s1Q9WVL1 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ap4s1Q9WVL1 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ap4s1Q9WVL1 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ap4s1Q9WVL1 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.65□□□□□ -0.38
Ap4s1Q9WVL1 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ap4s1Q9WVL1 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ap4s1Q9WVL1 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.65□□□□□ -0.38
Ap4s1Q9WVL1 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.65□□□□□ -0.38
Ap4s1Q9WVL1 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ap4s1Q9WVL1 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ap4s1Q9WVL1 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ap4s1Q9WVL1 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Ap4s1Q9WVL1 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Ap4s1Q9WVL1 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ap4s1Q9WVL1 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Ap4s1Q9WVL1 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ap4s1Q9WVL1 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ap4s1Q9WVL1 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Ap4s1Q9WVL1 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ap4s1Q9WVL1 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ap4s1Q9WVL1 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ap4s1Q9WVL1 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ap4s1Q9WVL1 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ap4s1Q9WVL1 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ap4s1Q9WVL1 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ap4s1Q9WVL1 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.64□□□□□ -0.39
Ap4s1Q9WVL1 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ap4s1Q9WVL1 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ap4s1Q9WVL1 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ap4s1Q9WVL1 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ap4s1Q9WVL1 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ap4s1Q9WVL1 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ap4s1Q9WVL1 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Ap4s1Q9WVL1 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ap4s1Q9WVL1 Mir8117-201ENSMUST00000184773 107 ntBASIC12.64□□□□□ -0.39
Ap4s1Q9WVL1 Gm17971-201ENSMUST00000190239 806 ntBASIC12.64□□□□□ -0.39
Ap4s1Q9WVL1 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ap4s1Q9WVL1 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ap4s1Q9WVL1 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.64□□□□□ -0.39
Ap4s1Q9WVL1 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ap4s1Q9WVL1 AC154621.1-201ENSMUST00000226155 1119 ntBASIC12.64□□□□□ -0.39
Ap4s1Q9WVL1 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ap4s1Q9WVL1 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ap4s1Q9WVL1 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ap4s1Q9WVL1 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ap4s1Q9WVL1 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.64□□□□□ -0.39
Ap4s1Q9WVL1 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.64□□□□□ -0.39
Ap4s1Q9WVL1 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ap4s1Q9WVL1 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ap4s1Q9WVL1 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ap4s1Q9WVL1 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ap4s1Q9WVL1 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ap4s1Q9WVL1 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ap4s1Q9WVL1 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.64□□□□□ -0.39
Ap4s1Q9WVL1 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ap4s1Q9WVL1 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.63□□□□□ -0.39
Ap4s1Q9WVL1 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Ap4s1Q9WVL1 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ap4s1Q9WVL1 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ap4s1Q9WVL1 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ap4s1Q9WVL1 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.63□□□□□ -0.39
Ap4s1Q9WVL1 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ap4s1Q9WVL1 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ap4s1Q9WVL1 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ap4s1Q9WVL1 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Ap4s1Q9WVL1 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Ap4s1Q9WVL1 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ap4s1Q9WVL1 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ap4s1Q9WVL1 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ap4s1Q9WVL1 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ap4s1Q9WVL1 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ap4s1Q9WVL1 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Ap4s1Q9WVL1 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.63□□□□□ -0.39
Ap4s1Q9WVL1 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ap4s1Q9WVL1 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC12.63□□□□□ -0.39
Ap4s1Q9WVL1 Gm9719-201ENSMUST00000162765 543 ntBASIC12.63□□□□□ -0.39
Ap4s1Q9WVL1 Gm17271-201ENSMUST00000165535 355 ntBASIC12.63□□□□□ -0.39
Ap4s1Q9WVL1 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC12.63□□□□□ -0.39
Ap4s1Q9WVL1 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC12.63□□□□□ -0.39
Ap4s1Q9WVL1 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Ap4s1Q9WVL1 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC12.63□□□□□ -0.39
Ap4s1Q9WVL1 Dupd1-202ENSMUST00000224735 548 ntBASIC12.63□□□□□ -0.39
Ap4s1Q9WVL1 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ap4s1Q9WVL1 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ap4s1Q9WVL1 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC12.63□□□□□ -0.39
Ap4s1Q9WVL1 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Ap4s1Q9WVL1 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ap4s1Q9WVL1 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ap4s1Q9WVL1 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ap4s1Q9WVL1 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ap4s1Q9WVL1 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ap4s1Q9WVL1 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ap4s1Q9WVL1 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ap4s1Q9WVL1 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.63□□□□□ -0.39
Ap4s1Q9WVL1 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ap4s1Q9WVL1 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ap4s1Q9WVL1 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ap4s1Q9WVL1 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
Ap4s1Q9WVL1 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
Ap4s1Q9WVL1 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms