Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sec61a2Q9JLR1 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sec61a2Q9JLR1 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sec61a2Q9JLR1 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sec61a2Q9JLR1 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Sec61a2Q9JLR1 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Sec61a2Q9JLR1 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sec61a2Q9JLR1 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sec61a2Q9JLR1 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sec61a2Q9JLR1 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC11.95□□□□□ -0.5
Sec61a2Q9JLR1 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Sec61a2Q9JLR1 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sec61a2Q9JLR1 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sec61a2Q9JLR1 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC11.94□□□□□ -0.5
Sec61a2Q9JLR1 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sec61a2Q9JLR1 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sec61a2Q9JLR1 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sec61a2Q9JLR1 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sec61a2Q9JLR1 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC11.94□□□□□ -0.5
Sec61a2Q9JLR1 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sec61a2Q9JLR1 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sec61a2Q9JLR1 Gm38037-201ENSMUST00000192600 1624 ntBASIC11.94□□□□□ -0.5
Sec61a2Q9JLR1 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sec61a2Q9JLR1 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Sec61a2Q9JLR1 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sec61a2Q9JLR1 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sec61a2Q9JLR1 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sec61a2Q9JLR1 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sec61a2Q9JLR1 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sec61a2Q9JLR1 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sec61a2Q9JLR1 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sec61a2Q9JLR1 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sec61a2Q9JLR1 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Sec61a2Q9JLR1 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sec61a2Q9JLR1 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC11.94□□□□□ -0.5
Sec61a2Q9JLR1 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sec61a2Q9JLR1 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sec61a2Q9JLR1 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sec61a2Q9JLR1 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sec61a2Q9JLR1 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC11.94□□□□□ -0.5
Sec61a2Q9JLR1 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC11.94□□□□□ -0.5
Sec61a2Q9JLR1 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sec61a2Q9JLR1 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sec61a2Q9JLR1 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sec61a2Q9JLR1 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sec61a2Q9JLR1 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sec61a2Q9JLR1 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Sec61a2Q9JLR1 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sec61a2Q9JLR1 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sec61a2Q9JLR1 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.94□□□□□ -0.5
Sec61a2Q9JLR1 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sec61a2Q9JLR1 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sec61a2Q9JLR1 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sec61a2Q9JLR1 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Sec61a2Q9JLR1 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sec61a2Q9JLR1 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
Sec61a2Q9JLR1 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Sec61a2Q9JLR1 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sec61a2Q9JLR1 Gm8775-201ENSMUST00000170943 1327 ntBASIC11.93□□□□□ -0.5
Sec61a2Q9JLR1 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Sec61a2Q9JLR1 Gm4782-201ENSMUST00000168705 2046 ntBASIC11.93□□□□□ -0.5
Sec61a2Q9JLR1 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sec61a2Q9JLR1 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sec61a2Q9JLR1 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Sec61a2Q9JLR1 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC11.93□□□□□ -0.5
Sec61a2Q9JLR1 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC11.93□□□□□ -0.5
Sec61a2Q9JLR1 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC11.93□□□□□ -0.5
Sec61a2Q9JLR1 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC11.93□□□□□ -0.5
Sec61a2Q9JLR1 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Sec61a2Q9JLR1 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Sec61a2Q9JLR1 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC11.93□□□□□ -0.5
Sec61a2Q9JLR1 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Sec61a2Q9JLR1 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Sec61a2Q9JLR1 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sec61a2Q9JLR1 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sec61a2Q9JLR1 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
Sec61a2Q9JLR1 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sec61a2Q9JLR1 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Sec61a2Q9JLR1 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sec61a2Q9JLR1 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC11.93□□□□□ -0.5
Sec61a2Q9JLR1 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Sec61a2Q9JLR1 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Sec61a2Q9JLR1 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sec61a2Q9JLR1 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Sec61a2Q9JLR1 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sec61a2Q9JLR1 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Sec61a2Q9JLR1 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sec61a2Q9JLR1 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sec61a2Q9JLR1 AC139350.1-201ENSMUST00000227064 1594 ntBASIC11.92□□□□□ -0.5
Sec61a2Q9JLR1 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Sec61a2Q9JLR1 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC11.92□□□□□ -0.5
Sec61a2Q9JLR1 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Sec61a2Q9JLR1 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Sec61a2Q9JLR1 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Sec61a2Q9JLR1 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sec61a2Q9JLR1 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sec61a2Q9JLR1 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Sec61a2Q9JLR1 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sec61a2Q9JLR1 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Sec61a2Q9JLR1 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms