Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
U2af1Q9D883 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
U2af1Q9D883 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
U2af1Q9D883 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
U2af1Q9D883 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
U2af1Q9D883 Dctn4-202ENSMUST00000223590 1530 ntBASIC17.37■□□□□ 0.37
U2af1Q9D883 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
U2af1Q9D883 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
U2af1Q9D883 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC17.37■□□□□ 0.37
U2af1Q9D883 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
U2af1Q9D883 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
U2af1Q9D883 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
U2af1Q9D883 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
U2af1Q9D883 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
U2af1Q9D883 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC17.37■□□□□ 0.37
U2af1Q9D883 Gm2639-201ENSMUST00000156881 1297 ntBASIC17.37■□□□□ 0.37
U2af1Q9D883 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
U2af1Q9D883 Mir7221-201ENSMUST00000184009 72 ntBASIC17.37■□□□□ 0.37
U2af1Q9D883 AC126253.1-201ENSMUST00000227974 824 ntBASIC17.37■□□□□ 0.37
U2af1Q9D883 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
U2af1Q9D883 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
U2af1Q9D883 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
U2af1Q9D883 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
U2af1Q9D883 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
U2af1Q9D883 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC17.37■□□□□ 0.37
U2af1Q9D883 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
U2af1Q9D883 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
U2af1Q9D883 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
U2af1Q9D883 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
U2af1Q9D883 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
U2af1Q9D883 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
U2af1Q9D883 Gm45242-201ENSMUST00000210666 2129 ntBASIC17.36■□□□□ 0.37
U2af1Q9D883 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
U2af1Q9D883 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
U2af1Q9D883 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
U2af1Q9D883 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
U2af1Q9D883 Gm12957-201ENSMUST00000117835 377 ntBASIC17.36■□□□□ 0.37
U2af1Q9D883 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
U2af1Q9D883 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC17.36■□□□□ 0.37
U2af1Q9D883 Gm7029-201ENSMUST00000173226 450 ntBASIC17.36■□□□□ 0.37
U2af1Q9D883 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
U2af1Q9D883 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
U2af1Q9D883 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
U2af1Q9D883 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
U2af1Q9D883 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
U2af1Q9D883 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
U2af1Q9D883 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC17.36■□□□□ 0.37
U2af1Q9D883 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
U2af1Q9D883 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
U2af1Q9D883 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
U2af1Q9D883 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
U2af1Q9D883 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
U2af1Q9D883 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
U2af1Q9D883 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
U2af1Q9D883 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
U2af1Q9D883 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
U2af1Q9D883 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
U2af1Q9D883 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
U2af1Q9D883 Snora78-201ENSMUST00000158630 128 ntBASIC17.35■□□□□ 0.37
U2af1Q9D883 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC17.35■□□□□ 0.37
U2af1Q9D883 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
U2af1Q9D883 Gm43438-201ENSMUST00000198133 379 ntBASIC17.35■□□□□ 0.37
U2af1Q9D883 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC17.35■□□□□ 0.37
U2af1Q9D883 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC17.35■□□□□ 0.37
U2af1Q9D883 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
U2af1Q9D883 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
U2af1Q9D883 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
U2af1Q9D883 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
U2af1Q9D883 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC17.35■□□□□ 0.37
U2af1Q9D883 Gm38049-201ENSMUST00000195698 1372 ntBASIC17.35■□□□□ 0.37
U2af1Q9D883 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
U2af1Q9D883 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
U2af1Q9D883 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
U2af1Q9D883 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
U2af1Q9D883 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC17.35■□□□□ 0.37
U2af1Q9D883 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
U2af1Q9D883 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
U2af1Q9D883 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
U2af1Q9D883 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
U2af1Q9D883 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
U2af1Q9D883 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
U2af1Q9D883 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
U2af1Q9D883 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
U2af1Q9D883 Gm28693-202ENSMUST00000190758 331 ntBASIC17.34■□□□□ 0.37
U2af1Q9D883 Gm6458-201ENSMUST00000211573 635 ntBASIC17.34■□□□□ 0.37
U2af1Q9D883 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
U2af1Q9D883 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
U2af1Q9D883 AC125350.2-201ENSMUST00000224737 727 ntBASIC17.34■□□□□ 0.37
U2af1Q9D883 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
U2af1Q9D883 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
U2af1Q9D883 Gm10268-201ENSMUST00000085340 555 ntBASIC17.34■□□□□ 0.37
U2af1Q9D883 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC17.34■□□□□ 0.37
U2af1Q9D883 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
U2af1Q9D883 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
U2af1Q9D883 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
U2af1Q9D883 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC17.34■□□□□ 0.37
U2af1Q9D883 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
U2af1Q9D883 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
U2af1Q9D883 Grk6-205ENSMUST00000224653 2976 ntBASIC17.34■□□□□ 0.37
U2af1Q9D883 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms