Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf111Q99ML9 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf111Q99ML9 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf111Q99ML9 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf111Q99ML9 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf111Q99ML9 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.84□□□□□ -0.35
Rnf111Q99ML9 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf111Q99ML9 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf111Q99ML9 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC12.84□□□□□ -0.35
Rnf111Q99ML9 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC12.84□□□□□ -0.35
Rnf111Q99ML9 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC12.84□□□□□ -0.35
Rnf111Q99ML9 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC12.84□□□□□ -0.35
Rnf111Q99ML9 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.84□□□□□ -0.35
Rnf111Q99ML9 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf111Q99ML9 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Rnf111Q99ML9 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Rnf111Q99ML9 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf111Q99ML9 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.84□□□□□ -0.35
Rnf111Q99ML9 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Rnf111Q99ML9 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf111Q99ML9 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.84□□□□□ -0.35
Rnf111Q99ML9 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf111Q99ML9 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf111Q99ML9 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf111Q99ML9 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf111Q99ML9 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf111Q99ML9 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf111Q99ML9 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf111Q99ML9 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf111Q99ML9 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.84□□□□□ -0.35
Rnf111Q99ML9 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf111Q99ML9 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf111Q99ML9 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Rnf111Q99ML9 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Rnf111Q99ML9 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Rnf111Q99ML9 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.83□□□□□ -0.35
Rnf111Q99ML9 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Rnf111Q99ML9 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Rnf111Q99ML9 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf111Q99ML9 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf111Q99ML9 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf111Q99ML9 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf111Q99ML9 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf111Q99ML9 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf111Q99ML9 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf111Q99ML9 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf111Q99ML9 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf111Q99ML9 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Rnf111Q99ML9 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC12.83□□□□□ -0.36
Rnf111Q99ML9 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf111Q99ML9 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf111Q99ML9 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf111Q99ML9 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf111Q99ML9 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Rnf111Q99ML9 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC12.83□□□□□ -0.36
Rnf111Q99ML9 AC124732.1-201ENSMUST00000221551 910 ntBASIC12.83□□□□□ -0.36
Rnf111Q99ML9 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.83□□□□□ -0.36
Rnf111Q99ML9 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf111Q99ML9 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf111Q99ML9 Hist1h2al-201ENSMUST00000091708 339 ntBASIC12.83□□□□□ -0.36
Rnf111Q99ML9 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf111Q99ML9 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf111Q99ML9 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf111Q99ML9 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf111Q99ML9 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf111Q99ML9 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf111Q99ML9 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf111Q99ML9 Gm3365-201ENSMUST00000216296 1480 ntBASIC12.83□□□□□ -0.36
Rnf111Q99ML9 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf111Q99ML9 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf111Q99ML9 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf111Q99ML9 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf111Q99ML9 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf111Q99ML9 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf111Q99ML9 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf111Q99ML9 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf111Q99ML9 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf111Q99ML9 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf111Q99ML9 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf111Q99ML9 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf111Q99ML9 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf111Q99ML9 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf111Q99ML9 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf111Q99ML9 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf111Q99ML9 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf111Q99ML9 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.82□□□□□ -0.36
Rnf111Q99ML9 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf111Q99ML9 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf111Q99ML9 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.82□□□□□ -0.36
Rnf111Q99ML9 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf111Q99ML9 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.82□□□□□ -0.36
Rnf111Q99ML9 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC12.82□□□□□ -0.36
Rnf111Q99ML9 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Rnf111Q99ML9 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.82□□□□□ -0.36
Rnf111Q99ML9 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.82□□□□□ -0.36
Rnf111Q99ML9 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf111Q99ML9 AC125206.2-201ENSMUST00000217454 574 ntBASIC12.82□□□□□ -0.36
Rnf111Q99ML9 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf111Q99ML9 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf111Q99ML9 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms