Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trerf1Q8BXJ2 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trerf1Q8BXJ2 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trerf1Q8BXJ2 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trerf1Q8BXJ2 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trerf1Q8BXJ2 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trerf1Q8BXJ2 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trerf1Q8BXJ2 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trerf1Q8BXJ2 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trerf1Q8BXJ2 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC14.01□□□□□ -0.17
Trerf1Q8BXJ2 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trerf1Q8BXJ2 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC14.01□□□□□ -0.17
Trerf1Q8BXJ2 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trerf1Q8BXJ2 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trerf1Q8BXJ2 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC14.01□□□□□ -0.17
Trerf1Q8BXJ2 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trerf1Q8BXJ2 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC14.01□□□□□ -0.17
Trerf1Q8BXJ2 Gm28631-201ENSMUST00000190740 334 ntBASIC14.01□□□□□ -0.17
Trerf1Q8BXJ2 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Trerf1Q8BXJ2 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trerf1Q8BXJ2 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trerf1Q8BXJ2 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trerf1Q8BXJ2 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trerf1Q8BXJ2 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Trerf1Q8BXJ2 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trerf1Q8BXJ2 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trerf1Q8BXJ2 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trerf1Q8BXJ2 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trerf1Q8BXJ2 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trerf1Q8BXJ2 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trerf1Q8BXJ2 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trerf1Q8BXJ2 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC14.01□□□□□ -0.17
Trerf1Q8BXJ2 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.01□□□□□ -0.17
Trerf1Q8BXJ2 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trerf1Q8BXJ2 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trerf1Q8BXJ2 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trerf1Q8BXJ2 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trerf1Q8BXJ2 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC14□□□□□ -0.17
Trerf1Q8BXJ2 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Trerf1Q8BXJ2 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC14□□□□□ -0.17
Trerf1Q8BXJ2 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Trerf1Q8BXJ2 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trerf1Q8BXJ2 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trerf1Q8BXJ2 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trerf1Q8BXJ2 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trerf1Q8BXJ2 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Trerf1Q8BXJ2 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Trerf1Q8BXJ2 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trerf1Q8BXJ2 Gm42872-201ENSMUST00000200026 1967 ntBASIC14□□□□□ -0.17
Trerf1Q8BXJ2 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trerf1Q8BXJ2 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trerf1Q8BXJ2 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trerf1Q8BXJ2 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trerf1Q8BXJ2 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trerf1Q8BXJ2 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trerf1Q8BXJ2 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trerf1Q8BXJ2 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trerf1Q8BXJ2 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC14□□□□□ -0.17
Trerf1Q8BXJ2 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC14□□□□□ -0.17
Trerf1Q8BXJ2 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trerf1Q8BXJ2 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC14□□□□□ -0.17
Trerf1Q8BXJ2 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC14□□□□□ -0.17
Trerf1Q8BXJ2 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC14□□□□□ -0.17
Trerf1Q8BXJ2 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trerf1Q8BXJ2 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trerf1Q8BXJ2 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trerf1Q8BXJ2 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trerf1Q8BXJ2 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trerf1Q8BXJ2 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trerf1Q8BXJ2 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trerf1Q8BXJ2 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trerf1Q8BXJ2 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trerf1Q8BXJ2 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trerf1Q8BXJ2 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trerf1Q8BXJ2 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trerf1Q8BXJ2 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Trerf1Q8BXJ2 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Trerf1Q8BXJ2 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trerf1Q8BXJ2 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trerf1Q8BXJ2 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.99□□□□□ -0.17
Trerf1Q8BXJ2 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Trerf1Q8BXJ2 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Trerf1Q8BXJ2 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC13.99□□□□□ -0.17
Trerf1Q8BXJ2 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Trerf1Q8BXJ2 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trerf1Q8BXJ2 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trerf1Q8BXJ2 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trerf1Q8BXJ2 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Trerf1Q8BXJ2 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Trerf1Q8BXJ2 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.99□□□□□ -0.17
Trerf1Q8BXJ2 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.99□□□□□ -0.17
Trerf1Q8BXJ2 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Trerf1Q8BXJ2 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Trerf1Q8BXJ2 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trerf1Q8BXJ2 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC13.99□□□□□ -0.17
Trerf1Q8BXJ2 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trerf1Q8BXJ2 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trerf1Q8BXJ2 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trerf1Q8BXJ2 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Trerf1Q8BXJ2 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms