Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Six4Q61321 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Six4Q61321 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Six4Q61321 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Six4Q61321 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Six4Q61321 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Six4Q61321 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Six4Q61321 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Six4Q61321 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.33□□□□□ -0.28
Six4Q61321 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Six4Q61321 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Six4Q61321 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Six4Q61321 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Six4Q61321 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC13.33□□□□□ -0.28
Six4Q61321 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Six4Q61321 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Six4Q61321 Gm11618-201ENSMUST00000117946 267 ntBASIC13.33□□□□□ -0.28
Six4Q61321 Mup-ps23-201ENSMUST00000118063 630 ntBASIC13.33□□□□□ -0.28
Six4Q61321 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC13.33□□□□□ -0.28
Six4Q61321 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Six4Q61321 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
Six4Q61321 Gm27486-201ENSMUST00000184923 80 ntBASIC13.33□□□□□ -0.28
Six4Q61321 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC13.33□□□□□ -0.28
Six4Q61321 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Six4Q61321 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Six4Q61321 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Six4Q61321 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Six4Q61321 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Six4Q61321 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Six4Q61321 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Six4Q61321 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Six4Q61321 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Six4Q61321 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Six4Q61321 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Six4Q61321 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Six4Q61321 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Six4Q61321 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC13.33□□□□□ -0.28
Six4Q61321 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Six4Q61321 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Six4Q61321 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Six4Q61321 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Six4Q61321 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Six4Q61321 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Six4Q61321 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Six4Q61321 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.32□□□□□ -0.28
Six4Q61321 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.32□□□□□ -0.28
Six4Q61321 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Six4Q61321 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Six4Q61321 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Six4Q61321 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Six4Q61321 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Six4Q61321 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Six4Q61321 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Six4Q61321 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Six4Q61321 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Six4Q61321 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC13.32□□□□□ -0.28
Six4Q61321 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Six4Q61321 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC13.32□□□□□ -0.28
Six4Q61321 Gm44799-201ENSMUST00000207639 1202 ntBASIC13.32□□□□□ -0.28
Six4Q61321 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC13.32□□□□□ -0.28
Six4Q61321 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Six4Q61321 AC132467.2-202ENSMUST00000227726 559 ntBASIC13.32□□□□□ -0.28
Six4Q61321 AC154276.1-201ENSMUST00000228874 1299 ntBASIC13.32□□□□□ -0.28
Six4Q61321 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Six4Q61321 Gm16372-201ENSMUST00000073088 450 ntBASIC13.32□□□□□ -0.28
Six4Q61321 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Six4Q61321 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Six4Q61321 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Six4Q61321 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.32□□□□□ -0.28
Six4Q61321 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Six4Q61321 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Six4Q61321 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Six4Q61321 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Six4Q61321 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Six4Q61321 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Six4Q61321 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Six4Q61321 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Six4Q61321 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Six4Q61321 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Six4Q61321 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Six4Q61321 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Six4Q61321 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Six4Q61321 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Six4Q61321 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Six4Q61321 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Six4Q61321 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Six4Q61321 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Six4Q61321 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Six4Q61321 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Six4Q61321 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Six4Q61321 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Six4Q61321 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Six4Q61321 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Six4Q61321 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Six4Q61321 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.31□□□□□ -0.28
Six4Q61321 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Six4Q61321 Gm13369-201ENSMUST00000119442 987 ntBASIC13.31□□□□□ -0.28
Six4Q61321 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Six4Q61321 Gm22331-201ENSMUST00000158066 136 ntBASIC13.31□□□□□ -0.28
Six4Q61321 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms