Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nlrc4Q3UP24 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Nlrc4Q3UP24 Gm24644-201ENSMUST00000157114 139 ntBASIC13.93□□□□□ -0.18
Nlrc4Q3UP24 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nlrc4Q3UP24 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC13.93□□□□□ -0.18
Nlrc4Q3UP24 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nlrc4Q3UP24 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nlrc4Q3UP24 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC13.93□□□□□ -0.18
Nlrc4Q3UP24 Gm5186-201ENSMUST00000218781 920 ntBASIC13.93□□□□□ -0.18
Nlrc4Q3UP24 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC13.93□□□□□ -0.18
Nlrc4Q3UP24 Gm16372-201ENSMUST00000073088 450 ntBASIC13.93□□□□□ -0.18
Nlrc4Q3UP24 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nlrc4Q3UP24 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nlrc4Q3UP24 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nlrc4Q3UP24 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.93□□□□□ -0.18
Nlrc4Q3UP24 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nlrc4Q3UP24 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nlrc4Q3UP24 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nlrc4Q3UP24 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Nlrc4Q3UP24 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nlrc4Q3UP24 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Nlrc4Q3UP24 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
Nlrc4Q3UP24 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nlrc4Q3UP24 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC13.93□□□□□ -0.18
Nlrc4Q3UP24 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nlrc4Q3UP24 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nlrc4Q3UP24 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nlrc4Q3UP24 Zscan30-202ENSMUST00000224144 1458 ntBASIC13.93□□□□□ -0.18
Nlrc4Q3UP24 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nlrc4Q3UP24 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nlrc4Q3UP24 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nlrc4Q3UP24 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nlrc4Q3UP24 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nlrc4Q3UP24 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Nlrc4Q3UP24 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
Nlrc4Q3UP24 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nlrc4Q3UP24 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nlrc4Q3UP24 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
Nlrc4Q3UP24 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.92□□□□□ -0.18
Nlrc4Q3UP24 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nlrc4Q3UP24 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.92□□□□□ -0.18
Nlrc4Q3UP24 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nlrc4Q3UP24 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nlrc4Q3UP24 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Nlrc4Q3UP24 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC13.92□□□□□ -0.18
Nlrc4Q3UP24 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC13.92□□□□□ -0.18
Nlrc4Q3UP24 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nlrc4Q3UP24 Gm13123-201ENSMUST00000122173 492 ntBASIC13.92□□□□□ -0.18
Nlrc4Q3UP24 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nlrc4Q3UP24 Gm27331-201ENSMUST00000183705 60 ntBASIC13.92□□□□□ -0.18
Nlrc4Q3UP24 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nlrc4Q3UP24 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC13.92□□□□□ -0.18
Nlrc4Q3UP24 Gm6266-201ENSMUST00000203844 806 ntBASIC13.92□□□□□ -0.18
Nlrc4Q3UP24 Gm44985-201ENSMUST00000206202 1016 ntBASIC13.92□□□□□ -0.18
Nlrc4Q3UP24 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC13.92□□□□□ -0.18
Nlrc4Q3UP24 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC13.92□□□□□ -0.18
Nlrc4Q3UP24 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nlrc4Q3UP24 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Nlrc4Q3UP24 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Nlrc4Q3UP24 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nlrc4Q3UP24 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.92□□□□□ -0.18
Nlrc4Q3UP24 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nlrc4Q3UP24 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nlrc4Q3UP24 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nlrc4Q3UP24 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nlrc4Q3UP24 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nlrc4Q3UP24 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Nlrc4Q3UP24 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nlrc4Q3UP24 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nlrc4Q3UP24 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.92□□□□□ -0.18
Nlrc4Q3UP24 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Nlrc4Q3UP24 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nlrc4Q3UP24 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nlrc4Q3UP24 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Nlrc4Q3UP24 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nlrc4Q3UP24 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Nlrc4Q3UP24 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.91□□□□□ -0.18
Nlrc4Q3UP24 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nlrc4Q3UP24 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.91□□□□□ -0.18
Nlrc4Q3UP24 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nlrc4Q3UP24 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nlrc4Q3UP24 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Nlrc4Q3UP24 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Nlrc4Q3UP24 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC13.91□□□□□ -0.18
Nlrc4Q3UP24 Gm4984-201ENSMUST00000115987 360 ntBASIC13.91□□□□□ -0.18
Nlrc4Q3UP24 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC13.91□□□□□ -0.18
Nlrc4Q3UP24 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nlrc4Q3UP24 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC13.91□□□□□ -0.18
Nlrc4Q3UP24 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC13.91□□□□□ -0.18
Nlrc4Q3UP24 Gm29127-201ENSMUST00000188304 517 ntBASIC13.91□□□□□ -0.18
Nlrc4Q3UP24 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Nlrc4Q3UP24 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC13.91□□□□□ -0.18
Nlrc4Q3UP24 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC13.91□□□□□ -0.18
Nlrc4Q3UP24 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Nlrc4Q3UP24 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC13.91□□□□□ -0.18
Nlrc4Q3UP24 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC13.91□□□□□ -0.18
Nlrc4Q3UP24 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nlrc4Q3UP24 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nlrc4Q3UP24 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nlrc4Q3UP24 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms