Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxc4Q08624 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxc4Q08624 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxc4Q08624 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC12.67□□□□□ -0.38
Hoxc4Q08624 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Hoxc4Q08624 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxc4Q08624 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxc4Q08624 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC12.67□□□□□ -0.38
Hoxc4Q08624 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxc4Q08624 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxc4Q08624 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxc4Q08624 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxc4Q08624 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxc4Q08624 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Hoxc4Q08624 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxc4Q08624 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxc4Q08624 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxc4Q08624 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxc4Q08624 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxc4Q08624 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.66□□□□□ -0.38
Hoxc4Q08624 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxc4Q08624 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Hoxc4Q08624 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxc4Q08624 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxc4Q08624 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxc4Q08624 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxc4Q08624 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.66□□□□□ -0.38
Hoxc4Q08624 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.66□□□□□ -0.38
Hoxc4Q08624 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxc4Q08624 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxc4Q08624 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxc4Q08624 Gm6023-201ENSMUST00000118217 606 ntBASIC12.66□□□□□ -0.38
Hoxc4Q08624 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.66□□□□□ -0.38
Hoxc4Q08624 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.66□□□□□ -0.38
Hoxc4Q08624 Mospd4-201ENSMUST00000180618 576 ntBASIC12.66□□□□□ -0.38
Hoxc4Q08624 Mir8109-201ENSMUST00000184375 117 ntBASIC12.66□□□□□ -0.38
Hoxc4Q08624 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.66□□□□□ -0.38
Hoxc4Q08624 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxc4Q08624 Gm7046-201ENSMUST00000221351 977 ntBASIC12.66□□□□□ -0.38
Hoxc4Q08624 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxc4Q08624 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxc4Q08624 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Hoxc4Q08624 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxc4Q08624 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxc4Q08624 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Hoxc4Q08624 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.66□□□□□ -0.38
Hoxc4Q08624 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxc4Q08624 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxc4Q08624 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Hoxc4Q08624 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxc4Q08624 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxc4Q08624 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Hoxc4Q08624 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxc4Q08624 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxc4Q08624 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxc4Q08624 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxc4Q08624 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.65□□□□□ -0.38
Hoxc4Q08624 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxc4Q08624 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Hoxc4Q08624 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC12.65□□□□□ -0.38
Hoxc4Q08624 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.65□□□□□ -0.38
Hoxc4Q08624 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxc4Q08624 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.65□□□□□ -0.38
Hoxc4Q08624 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Hoxc4Q08624 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxc4Q08624 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxc4Q08624 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.65□□□□□ -0.38
Hoxc4Q08624 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxc4Q08624 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxc4Q08624 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxc4Q08624 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxc4Q08624 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxc4Q08624 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxc4Q08624 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.65□□□□□ -0.38
Hoxc4Q08624 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxc4Q08624 Gm14921-201ENSMUST00000118643 908 ntBASIC12.65□□□□□ -0.38
Hoxc4Q08624 Gm13297-201ENSMUST00000120205 934 ntBASIC12.65□□□□□ -0.38
Hoxc4Q08624 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Hoxc4Q08624 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC12.65□□□□□ -0.38
Hoxc4Q08624 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC12.65□□□□□ -0.38
Hoxc4Q08624 Gm9368-201ENSMUST00000219348 831 ntBASIC12.65□□□□□ -0.38
Hoxc4Q08624 Gm8227-201ENSMUST00000223306 571 ntBASIC12.65□□□□□ -0.38
Hoxc4Q08624 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Hoxc4Q08624 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxc4Q08624 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Hoxc4Q08624 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC12.65□□□□□ -0.38
Hoxc4Q08624 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxc4Q08624 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxc4Q08624 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxc4Q08624 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxc4Q08624 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC12.65□□□□□ -0.38
Hoxc4Q08624 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxc4Q08624 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.65□□□□□ -0.38
Hoxc4Q08624 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.65□□□□□ -0.38
Hoxc4Q08624 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxc4Q08624 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Hoxc4Q08624 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Hoxc4Q08624 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxc4Q08624 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12.64□□□□□ -0.39
Hoxc4Q08624 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms