Protein–RNA interactions for Protein: P97785

Gfra1, GDNF family receptor alpha-1, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra1P97785 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gfra1P97785 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gfra1P97785 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gfra1P97785 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC10.94□□□□□ -0.66
Gfra1P97785 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Gfra1P97785 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gfra1P97785 Gm5639-201ENSMUST00000122305 2403 ntBASIC10.94□□□□□ -0.66
Gfra1P97785 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC10.94□□□□□ -0.66
Gfra1P97785 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Gfra1P97785 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Gfra1P97785 Gm10327-201ENSMUST00000105222 1002 ntBASIC10.94□□□□□ -0.66
Gfra1P97785 Gm12742-201ENSMUST00000117326 410 ntBASIC10.94□□□□□ -0.66
Gfra1P97785 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
Gfra1P97785 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC10.94□□□□□ -0.66
Gfra1P97785 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Gfra1P97785 Snora78-201ENSMUST00000158630 128 ntBASIC10.94□□□□□ -0.66
Gfra1P97785 Proscos-202ENSMUST00000178990 666 ntBASIC10.94□□□□□ -0.66
Gfra1P97785 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Gfra1P97785 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC10.94□□□□□ -0.66
Gfra1P97785 Mir7085-201ENSMUST00000184353 66 ntBASIC10.94□□□□□ -0.66
Gfra1P97785 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Gfra1P97785 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC10.94□□□□□ -0.66
Gfra1P97785 Gm43438-201ENSMUST00000198133 379 ntBASIC10.94□□□□□ -0.66
Gfra1P97785 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Gfra1P97785 Gm43818-201ENSMUST00000200605 466 ntBASIC10.94□□□□□ -0.66
Gfra1P97785 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC10.94□□□□□ -0.66
Gfra1P97785 Gm45841-201ENSMUST00000207700 164 ntBASIC10.94□□□□□ -0.66
Gfra1P97785 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC10.94□□□□□ -0.66
Gfra1P97785 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC10.94□□□□□ -0.66
Gfra1P97785 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC10.94□□□□□ -0.66
Gfra1P97785 Gm8598-201ENSMUST00000221184 836 ntBASIC10.94□□□□□ -0.66
Gfra1P97785 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gfra1P97785 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gfra1P97785 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC10.94□□□□□ -0.66
Gfra1P97785 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gfra1P97785 Gm10040-201ENSMUST00000080726 1662 ntBASIC10.94□□□□□ -0.66
Gfra1P97785 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gfra1P97785 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC10.94□□□□□ -0.66
Gfra1P97785 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Gfra1P97785 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gfra1P97785 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gfra1P97785 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Gfra1P97785 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gfra1P97785 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Gfra1P97785 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gfra1P97785 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gfra1P97785 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC10.93□□□□□ -0.66
Gfra1P97785 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gfra1P97785 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gfra1P97785 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
Gfra1P97785 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gfra1P97785 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC10.93□□□□□ -0.66
Gfra1P97785 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gfra1P97785 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Gfra1P97785 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC10.93□□□□□ -0.66
Gfra1P97785 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC10.93□□□□□ -0.66
Gfra1P97785 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Gfra1P97785 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC10.93□□□□□ -0.66
Gfra1P97785 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gfra1P97785 Gm8810-201ENSMUST00000172895 754 ntBASIC10.93□□□□□ -0.66
Gfra1P97785 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC10.93□□□□□ -0.66
Gfra1P97785 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Gfra1P97785 Gm29127-201ENSMUST00000188304 517 ntBASIC10.93□□□□□ -0.66
Gfra1P97785 AC166349.1-201ENSMUST00000220866 695 ntBASIC10.93□□□□□ -0.66
Gfra1P97785 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gfra1P97785 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gfra1P97785 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC10.93□□□□□ -0.66
Gfra1P97785 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Gfra1P97785 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Gfra1P97785 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gfra1P97785 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gfra1P97785 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gfra1P97785 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Gfra1P97785 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gfra1P97785 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Gfra1P97785 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gfra1P97785 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gfra1P97785 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Gfra1P97785 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gfra1P97785 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Gfra1P97785 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Gfra1P97785 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Gfra1P97785 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Gfra1P97785 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC10.93□□□□□ -0.66
Gfra1P97785 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC10.92□□□□□ -0.66
Gfra1P97785 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
Gfra1P97785 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Gfra1P97785 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
Gfra1P97785 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC10.92□□□□□ -0.66
Gfra1P97785 Gm42829-201ENSMUST00000198417 2585 ntBASIC10.92□□□□□ -0.66
Gfra1P97785 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gfra1P97785 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Gfra1P97785 Gm2420-202ENSMUST00000202224 2249 ntBASIC10.92□□□□□ -0.66
Gfra1P97785 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Gfra1P97785 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gfra1P97785 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Gfra1P97785 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gfra1P97785 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gfra1P97785 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Gfra1P97785 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms