Protein–RNA interactions for Protein: P82347

Sgcd, Delta-sarcoglycan, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcdP82347 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SgcdP82347 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SgcdP82347 Mir7684-201ENSMUST00000183858 60 ntBASIC12.3□□□□□ -0.44
SgcdP82347 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC12.3□□□□□ -0.44
SgcdP82347 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SgcdP82347 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SgcdP82347 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
SgcdP82347 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SgcdP82347 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SgcdP82347 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SgcdP82347 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SgcdP82347 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
SgcdP82347 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SgcdP82347 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SgcdP82347 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
SgcdP82347 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SgcdP82347 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SgcdP82347 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
SgcdP82347 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SgcdP82347 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
SgcdP82347 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
SgcdP82347 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
SgcdP82347 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.29□□□□□ -0.44
SgcdP82347 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
SgcdP82347 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SgcdP82347 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SgcdP82347 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
SgcdP82347 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.29□□□□□ -0.44
SgcdP82347 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
SgcdP82347 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SgcdP82347 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SgcdP82347 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SgcdP82347 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SgcdP82347 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SgcdP82347 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
SgcdP82347 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SgcdP82347 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC12.29□□□□□ -0.44
SgcdP82347 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
SgcdP82347 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC12.29□□□□□ -0.44
SgcdP82347 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
SgcdP82347 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC12.29□□□□□ -0.44
SgcdP82347 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SgcdP82347 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC12.29□□□□□ -0.44
SgcdP82347 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SgcdP82347 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12.29□□□□□ -0.44
SgcdP82347 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC12.29□□□□□ -0.44
SgcdP82347 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SgcdP82347 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SgcdP82347 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC12.29□□□□□ -0.44
SgcdP82347 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
SgcdP82347 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SgcdP82347 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
SgcdP82347 Hist1h2al-201ENSMUST00000091708 339 ntBASIC12.29□□□□□ -0.44
SgcdP82347 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.29□□□□□ -0.44
SgcdP82347 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SgcdP82347 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
SgcdP82347 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
SgcdP82347 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SgcdP82347 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SgcdP82347 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SgcdP82347 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
SgcdP82347 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SgcdP82347 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SgcdP82347 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
SgcdP82347 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SgcdP82347 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SgcdP82347 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SgcdP82347 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SgcdP82347 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
SgcdP82347 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
SgcdP82347 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SgcdP82347 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SgcdP82347 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SgcdP82347 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SgcdP82347 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SgcdP82347 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
SgcdP82347 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
SgcdP82347 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SgcdP82347 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SgcdP82347 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.28□□□□□ -0.44
SgcdP82347 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SgcdP82347 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SgcdP82347 Gm2810-201ENSMUST00000118681 990 ntBASIC12.28□□□□□ -0.44
SgcdP82347 Gm15957-201ENSMUST00000118893 974 ntBASIC12.28□□□□□ -0.44
SgcdP82347 Gm15693-201ENSMUST00000120470 637 ntBASIC12.28□□□□□ -0.44
SgcdP82347 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC12.28□□□□□ -0.44
SgcdP82347 Gm27306-201ENSMUST00000183970 107 ntBASIC12.28□□□□□ -0.44
SgcdP82347 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC12.28□□□□□ -0.44
SgcdP82347 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
SgcdP82347 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC12.28□□□□□ -0.44
SgcdP82347 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SgcdP82347 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SgcdP82347 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.28□□□□□ -0.44
SgcdP82347 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SgcdP82347 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SgcdP82347 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SgcdP82347 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
SgcdP82347 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SgcdP82347 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SgcdP82347 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms