Protein–RNA interactions for Protein: P70662

Ldb1, LIM domain-binding protein 1, mousemouse

Predictions only

Length 411 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1P70662 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC13.18□□□□□ -0.3
Ldb1P70662 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC13.18□□□□□ -0.3
Ldb1P70662 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
Ldb1P70662 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC13.18□□□□□ -0.3
Ldb1P70662 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC13.18□□□□□ -0.3
Ldb1P70662 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ldb1P70662 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Ldb1P70662 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ldb1P70662 Gtpbp10-211ENSMUST00000198799 648 ntBASIC13.18□□□□□ -0.3
Ldb1P70662 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ldb1P70662 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ldb1P70662 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ldb1P70662 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ldb1P70662 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Ldb1P70662 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ldb1P70662 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ldb1P70662 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ldb1P70662 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ldb1P70662 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ldb1P70662 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ldb1P70662 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Ldb1P70662 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ldb1P70662 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ldb1P70662 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ldb1P70662 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ldb1P70662 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ldb1P70662 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ldb1P70662 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ldb1P70662 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ldb1P70662 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ldb1P70662 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ldb1P70662 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ldb1P70662 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Ldb1P70662 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ldb1P70662 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ldb1P70662 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Ldb1P70662 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ldb1P70662 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ldb1P70662 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ldb1P70662 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ldb1P70662 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Ldb1P70662 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Ldb1P70662 Gm5303-201ENSMUST00000117943 1252 ntBASIC13.17□□□□□ -0.3
Ldb1P70662 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ldb1P70662 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ldb1P70662 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ldb1P70662 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ldb1P70662 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ldb1P70662 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ldb1P70662 Gm15823-201ENSMUST00000064305 670 ntBASIC13.17□□□□□ -0.3
Ldb1P70662 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ldb1P70662 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.17□□□□□ -0.3
Ldb1P70662 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ldb1P70662 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Ldb1P70662 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ldb1P70662 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.17□□□□□ -0.3
Ldb1P70662 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ldb1P70662 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.17□□□□□ -0.3
Ldb1P70662 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ldb1P70662 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ldb1P70662 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ldb1P70662 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC13.17□□□□□ -0.3
Ldb1P70662 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ldb1P70662 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.17□□□□□ -0.3
Ldb1P70662 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ldb1P70662 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ldb1P70662 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ldb1P70662 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Ldb1P70662 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ldb1P70662 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ldb1P70662 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ldb1P70662 Gm6447-201ENSMUST00000118905 835 ntBASIC13.16□□□□□ -0.3
Ldb1P70662 Gm15429-201ENSMUST00000151268 798 ntBASIC13.16□□□□□ -0.3
Ldb1P70662 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ldb1P70662 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ldb1P70662 Gm45668-201ENSMUST00000211271 493 ntBASIC13.16□□□□□ -0.3
Ldb1P70662 Gm18041-201ENSMUST00000218210 618 ntBASIC13.16□□□□□ -0.3
Ldb1P70662 AC159006.1-201ENSMUST00000226396 258 ntBASIC13.16□□□□□ -0.3
Ldb1P70662 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ldb1P70662 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ldb1P70662 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Ldb1P70662 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ldb1P70662 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ldb1P70662 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ldb1P70662 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ldb1P70662 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Ldb1P70662 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ldb1P70662 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ldb1P70662 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ldb1P70662 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ldb1P70662 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ldb1P70662 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ldb1P70662 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ldb1P70662 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ldb1P70662 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.15□□□□□ -0.3
Ldb1P70662 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ldb1P70662 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ldb1P70662 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ldb1P70662 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ldb1P70662 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms