Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shox2P70390 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC13.05□□□□□ -0.32
Shox2P70390 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.05□□□□□ -0.32
Shox2P70390 Gm6916-202ENSMUST00000205523 195 ntBASIC13.05□□□□□ -0.32
Shox2P70390 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shox2P70390 Umpk-ps-201ENSMUST00000211897 827 ntBASIC13.05□□□□□ -0.32
Shox2P70390 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC13.05□□□□□ -0.32
Shox2P70390 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC13.05□□□□□ -0.32
Shox2P70390 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shox2P70390 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shox2P70390 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shox2P70390 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shox2P70390 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shox2P70390 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC13.05□□□□□ -0.32
Shox2P70390 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shox2P70390 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shox2P70390 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shox2P70390 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Shox2P70390 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.05□□□□□ -0.32
Shox2P70390 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.05□□□□□ -0.32
Shox2P70390 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shox2P70390 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shox2P70390 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shox2P70390 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Shox2P70390 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Shox2P70390 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shox2P70390 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shox2P70390 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shox2P70390 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shox2P70390 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shox2P70390 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shox2P70390 Gm37849-201ENSMUST00000194722 1881 ntBASIC13.04□□□□□ -0.32
Shox2P70390 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shox2P70390 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Shox2P70390 AC160410.1-201ENSMUST00000219298 1972 ntBASIC13.04□□□□□ -0.32
Shox2P70390 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shox2P70390 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shox2P70390 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Shox2P70390 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shox2P70390 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC13.04□□□□□ -0.32
Shox2P70390 Gm6226-201ENSMUST00000117765 1146 ntBASIC13.04□□□□□ -0.32
Shox2P70390 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Shox2P70390 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Shox2P70390 Gm27390-201ENSMUST00000184516 176 ntBASIC13.04□□□□□ -0.32
Shox2P70390 Ank2-226ENSMUST00000189368 339 ntBASIC13.04□□□□□ -0.32
Shox2P70390 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shox2P70390 AC169036.1-201ENSMUST00000227994 296 ntBASIC13.04□□□□□ -0.32
Shox2P70390 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shox2P70390 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shox2P70390 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shox2P70390 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shox2P70390 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC13.04□□□□□ -0.32
Shox2P70390 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shox2P70390 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shox2P70390 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Shox2P70390 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shox2P70390 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shox2P70390 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Shox2P70390 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Shox2P70390 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shox2P70390 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Shox2P70390 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Shox2P70390 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Shox2P70390 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shox2P70390 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Shox2P70390 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Shox2P70390 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shox2P70390 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shox2P70390 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shox2P70390 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Shox2P70390 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Shox2P70390 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC13.03□□□□□ -0.32
Shox2P70390 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shox2P70390 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shox2P70390 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Shox2P70390 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shox2P70390 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Shox2P70390 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Shox2P70390 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shox2P70390 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shox2P70390 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Shox2P70390 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shox2P70390 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Shox2P70390 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.03□□□□□ -0.32
Shox2P70390 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Shox2P70390 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Shox2P70390 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Shox2P70390 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Shox2P70390 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shox2P70390 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shox2P70390 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Shox2P70390 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shox2P70390 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shox2P70390 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shox2P70390 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shox2P70390 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC13.03□□□□□ -0.32
Shox2P70390 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Shox2P70390 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.03□□□□□ -0.32
Shox2P70390 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Shox2P70390 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms