Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Crnkl1P63154 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Crnkl1P63154 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Crnkl1P63154 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Crnkl1P63154 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Crnkl1P63154 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Crnkl1P63154 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Crnkl1P63154 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Crnkl1P63154 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Crnkl1P63154 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Crnkl1P63154 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Crnkl1P63154 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Crnkl1P63154 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Crnkl1P63154 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Crnkl1P63154 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Crnkl1P63154 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Crnkl1P63154 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC13.09□□□□□ -0.31
Crnkl1P63154 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Crnkl1P63154 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.09□□□□□ -0.31
Crnkl1P63154 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Crnkl1P63154 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Crnkl1P63154 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Crnkl1P63154 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Crnkl1P63154 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Crnkl1P63154 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Crnkl1P63154 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Crnkl1P63154 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Crnkl1P63154 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC13.09□□□□□ -0.31
Crnkl1P63154 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Crnkl1P63154 Gm13616-201ENSMUST00000120600 222 ntBASIC13.09□□□□□ -0.31
Crnkl1P63154 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
Crnkl1P63154 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Crnkl1P63154 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Crnkl1P63154 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Crnkl1P63154 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC13.09□□□□□ -0.31
Crnkl1P63154 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.09□□□□□ -0.31
Crnkl1P63154 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC13.09□□□□□ -0.31
Crnkl1P63154 AC124732.2-201ENSMUST00000221977 316 ntBASIC13.09□□□□□ -0.31
Crnkl1P63154 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Crnkl1P63154 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Crnkl1P63154 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Crnkl1P63154 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Crnkl1P63154 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Crnkl1P63154 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Crnkl1P63154 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Crnkl1P63154 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Crnkl1P63154 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.09□□□□□ -0.31
Crnkl1P63154 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Crnkl1P63154 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC13.09□□□□□ -0.31
Crnkl1P63154 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Crnkl1P63154 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Crnkl1P63154 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Crnkl1P63154 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Crnkl1P63154 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Crnkl1P63154 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Crnkl1P63154 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.31
Crnkl1P63154 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Crnkl1P63154 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Crnkl1P63154 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Crnkl1P63154 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Crnkl1P63154 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Crnkl1P63154 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Crnkl1P63154 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Crnkl1P63154 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
Crnkl1P63154 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Crnkl1P63154 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Crnkl1P63154 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Crnkl1P63154 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC13.08□□□□□ -0.32
Crnkl1P63154 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Crnkl1P63154 Gm25948-201ENSMUST00000175334 112 ntBASIC13.08□□□□□ -0.32
Crnkl1P63154 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.08□□□□□ -0.32
Crnkl1P63154 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC13.08□□□□□ -0.32
Crnkl1P63154 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.08□□□□□ -0.32
Crnkl1P63154 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Crnkl1P63154 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Crnkl1P63154 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Crnkl1P63154 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.08□□□□□ -0.32
Crnkl1P63154 CT009757.3-201ENSMUST00000223367 2320 ntBASIC13.08□□□□□ -0.32
Crnkl1P63154 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Crnkl1P63154 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Crnkl1P63154 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Crnkl1P63154 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Crnkl1P63154 Gm42466-201ENSMUST00000202099 1301 ntBASIC13.08□□□□□ -0.32
Crnkl1P63154 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Crnkl1P63154 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.08□□□□□ -0.32
Crnkl1P63154 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Crnkl1P63154 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Crnkl1P63154 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Crnkl1P63154 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Crnkl1P63154 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Crnkl1P63154 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC13.08□□□□□ -0.32
Crnkl1P63154 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Crnkl1P63154 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Crnkl1P63154 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Crnkl1P63154 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Crnkl1P63154 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Crnkl1P63154 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC13.07□□□□□ -0.32
Crnkl1P63154 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Crnkl1P63154 Gm15920-201ENSMUST00000118998 402 ntBASIC13.07□□□□□ -0.32
Crnkl1P63154 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms