Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Sssca1P56873 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sssca1P56873 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Sssca1P56873 AC116503.1-201ENSMUST00000215445 2192 ntBASIC10.69□□□□□ -0.7
Sssca1P56873 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC10.69□□□□□ -0.7
Sssca1P56873 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Sssca1P56873 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sssca1P56873 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sssca1P56873 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sssca1P56873 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Sssca1P56873 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Sssca1P56873 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sssca1P56873 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Sssca1P56873 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sssca1P56873 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Sssca1P56873 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sssca1P56873 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sssca1P56873 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Sssca1P56873 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC10.69□□□□□ -0.7
Sssca1P56873 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
Sssca1P56873 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sssca1P56873 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sssca1P56873 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC10.69□□□□□ -0.7
Sssca1P56873 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sssca1P56873 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Sssca1P56873 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC10.69□□□□□ -0.7
Sssca1P56873 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Sssca1P56873 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sssca1P56873 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Sssca1P56873 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sssca1P56873 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sssca1P56873 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sssca1P56873 Kcnk16-202ENSMUST00000225596 2127 ntBASIC10.69□□□□□ -0.7
Sssca1P56873 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC10.69□□□□□ -0.7
Sssca1P56873 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Sssca1P56873 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC10.68□□□□□ -0.7
Sssca1P56873 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sssca1P56873 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Sssca1P56873 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Sssca1P56873 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sssca1P56873 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sssca1P56873 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Sssca1P56873 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sssca1P56873 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sssca1P56873 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Sssca1P56873 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sssca1P56873 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC10.68□□□□□ -0.7
Sssca1P56873 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sssca1P56873 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC10.68□□□□□ -0.7
Sssca1P56873 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sssca1P56873 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sssca1P56873 AC164107.1-201ENSMUST00000227730 2161 ntBASIC10.68□□□□□ -0.7
Sssca1P56873 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sssca1P56873 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC10.68□□□□□ -0.7
Sssca1P56873 Gm15693-201ENSMUST00000120470 637 ntBASIC10.68□□□□□ -0.7
Sssca1P56873 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sssca1P56873 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sssca1P56873 Gm25144-201ENSMUST00000179561 110 ntBASIC10.68□□□□□ -0.7
Sssca1P56873 Gm25352-201ENSMUST00000179815 110 ntBASIC10.68□□□□□ -0.7
Sssca1P56873 Mir7221-201ENSMUST00000184009 72 ntBASIC10.68□□□□□ -0.7
Sssca1P56873 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Sssca1P56873 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC10.68□□□□□ -0.7
Sssca1P56873 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC10.68□□□□□ -0.7
Sssca1P56873 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
Sssca1P56873 Gm45841-201ENSMUST00000207700 164 ntBASIC10.68□□□□□ -0.7
Sssca1P56873 AW822252-206ENSMUST00000208904 237 ntBASIC10.68□□□□□ -0.7
Sssca1P56873 AC140397.2-201ENSMUST00000224213 834 ntBASIC10.68□□□□□ -0.7
Sssca1P56873 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sssca1P56873 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Sssca1P56873 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sssca1P56873 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sssca1P56873 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC10.68□□□□□ -0.7
Sssca1P56873 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sssca1P56873 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sssca1P56873 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sssca1P56873 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sssca1P56873 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Sssca1P56873 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Sssca1P56873 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sssca1P56873 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC10.68□□□□□ -0.7
Sssca1P56873 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sssca1P56873 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sssca1P56873 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sssca1P56873 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sssca1P56873 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sssca1P56873 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Sssca1P56873 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Sssca1P56873 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sssca1P56873 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Sssca1P56873 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sssca1P56873 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sssca1P56873 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sssca1P56873 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC10.67□□□□□ -0.7
Sssca1P56873 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sssca1P56873 AC151895.1-201ENSMUST00000219025 1742 ntBASIC10.67□□□□□ -0.7
Sssca1P56873 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sssca1P56873 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC10.67□□□□□ -0.7
Sssca1P56873 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sssca1P56873 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sssca1P56873 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms