Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm24447-201ENSMUST00000083977 338 ntBASIC14.42□□□□□ -0.1
Chmp6P0C0A3 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Chmp6P0C0A3 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp6P0C0A3 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp6P0C0A3 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14.42□□□□□ -0.1
Chmp6P0C0A3 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp6P0C0A3 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Chmp6P0C0A3 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC14.42□□□□□ -0.1
Chmp6P0C0A3 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp6P0C0A3 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp6P0C0A3 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp6P0C0A3 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp6P0C0A3 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chmp6P0C0A3 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chmp6P0C0A3 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC14.41□□□□□ -0.1
Chmp6P0C0A3 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Chmp6P0C0A3 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chmp6P0C0A3 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Chmp6P0C0A3 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Chmp6P0C0A3 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
Chmp6P0C0A3 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chmp6P0C0A3 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chmp6P0C0A3 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chmp6P0C0A3 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC14.41□□□□□ -0.1
Chmp6P0C0A3 Gm15371-201ENSMUST00000117057 784 ntBASIC14.41□□□□□ -0.1
Chmp6P0C0A3 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Chmp6P0C0A3 Gm16342-201ENSMUST00000124025 1025 ntBASIC14.41□□□□□ -0.1
Chmp6P0C0A3 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC14.41□□□□□ -0.1
Chmp6P0C0A3 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC14.41□□□□□ -0.1
Chmp6P0C0A3 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Chmp6P0C0A3 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC14.41□□□□□ -0.1
Chmp6P0C0A3 AC162801.1-201ENSMUST00000220612 198 ntBASIC14.41□□□□□ -0.1
Chmp6P0C0A3 AC150560.1-201ENSMUST00000227731 1187 ntBASIC14.41□□□□□ -0.1
Chmp6P0C0A3 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chmp6P0C0A3 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chmp6P0C0A3 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Chmp6P0C0A3 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chmp6P0C0A3 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chmp6P0C0A3 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chmp6P0C0A3 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chmp6P0C0A3 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chmp6P0C0A3 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chmp6P0C0A3 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chmp6P0C0A3 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chmp6P0C0A3 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chmp6P0C0A3 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC14.41□□□□□ -0.1
Chmp6P0C0A3 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Chmp6P0C0A3 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC14.41□□□□□ -0.1
Chmp6P0C0A3 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
Chmp6P0C0A3 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Chmp6P0C0A3 Gm37795-201ENSMUST00000194216 2459 ntBASIC14.4□□□□□ -0.1
Chmp6P0C0A3 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC14.4□□□□□ -0.1
Chmp6P0C0A3 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Chmp6P0C0A3 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chmp6P0C0A3 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chmp6P0C0A3 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chmp6P0C0A3 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chmp6P0C0A3 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Chmp6P0C0A3 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC14.4□□□□□ -0.1
Chmp6P0C0A3 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Chmp6P0C0A3 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Chmp6P0C0A3 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Chmp6P0C0A3 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chmp6P0C0A3 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chmp6P0C0A3 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Chmp6P0C0A3 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chmp6P0C0A3 Gm11478-201ENSMUST00000117851 599 ntBASIC14.4□□□□□ -0.1
Chmp6P0C0A3 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Chmp6P0C0A3 Gm29608-201ENSMUST00000190444 463 ntBASIC14.4□□□□□ -0.1
Chmp6P0C0A3 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC14.4□□□□□ -0.1
Chmp6P0C0A3 Gm17870-201ENSMUST00000219489 1174 ntBASIC14.4□□□□□ -0.1
Chmp6P0C0A3 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Chmp6P0C0A3 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Chmp6P0C0A3 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chmp6P0C0A3 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chmp6P0C0A3 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chmp6P0C0A3 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chmp6P0C0A3 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chmp6P0C0A3 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chmp6P0C0A3 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chmp6P0C0A3 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chmp6P0C0A3 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Chmp6P0C0A3 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chmp6P0C0A3 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC14.4□□□□□ -0.1
Chmp6P0C0A3 AC238940.1-201ENSMUST00000225106 1858 ntBASIC14.4□□□□□ -0.1
Chmp6P0C0A3 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Chmp6P0C0A3 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chmp6P0C0A3 Gm9924-202ENSMUST00000192760 2311 ntBASIC14.4□□□□□ -0.11
Chmp6P0C0A3 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Chmp6P0C0A3 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp6P0C0A3 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp6P0C0A3 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp6P0C0A3 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp6P0C0A3 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp6P0C0A3 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp6P0C0A3 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp6P0C0A3 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp6P0C0A3 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp6P0C0A3 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp6P0C0A3 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms