Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Gm6963-201ENSMUST00000147879 379 ntBASIC15.93■□□□□ 0.14
Col4a1P02463 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Col4a1P02463 Gm19994-201ENSMUST00000217086 586 ntBASIC15.93■□□□□ 0.14
Col4a1P02463 Gm45925-201ENSMUST00000218882 744 ntBASIC15.93■□□□□ 0.14
Col4a1P02463 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC15.93■□□□□ 0.14
Col4a1P02463 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col4a1P02463 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col4a1P02463 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col4a1P02463 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Col4a1P02463 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col4a1P02463 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col4a1P02463 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC15.93■□□□□ 0.14
Col4a1P02463 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col4a1P02463 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col4a1P02463 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col4a1P02463 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col4a1P02463 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col4a1P02463 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC15.92■□□□□ 0.14
Col4a1P02463 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Col4a1P02463 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Col4a1P02463 Gm12380-201ENSMUST00000119012 544 ntBASIC15.92■□□□□ 0.14
Col4a1P02463 Gm22334-201ENSMUST00000158070 133 ntBASIC15.92■□□□□ 0.14
Col4a1P02463 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC15.92■□□□□ 0.14
Col4a1P02463 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col4a1P02463 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC15.92■□□□□ 0.14
Col4a1P02463 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC15.92■□□□□ 0.14
Col4a1P02463 Gm18212-201ENSMUST00000211678 889 ntBASIC15.92■□□□□ 0.14
Col4a1P02463 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC15.92■□□□□ 0.14
Col4a1P02463 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Col4a1P02463 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col4a1P02463 Gm5846-201ENSMUST00000193146 1414 ntBASIC15.92■□□□□ 0.14
Col4a1P02463 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Col4a1P02463 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col4a1P02463 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Col4a1P02463 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col4a1P02463 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col4a1P02463 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC15.92■□□□□ 0.14
Col4a1P02463 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col4a1P02463 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Col4a1P02463 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Col4a1P02463 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col4a1P02463 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col4a1P02463 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Col4a1P02463 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col4a1P02463 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col4a1P02463 Gm9083-201ENSMUST00000120423 819 ntBASIC15.92■□□□□ 0.14
Col4a1P02463 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC15.92■□□□□ 0.14
Col4a1P02463 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Col4a1P02463 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Col4a1P02463 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Col4a1P02463 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC15.92■□□□□ 0.14
Col4a1P02463 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC15.92■□□□□ 0.14
Col4a1P02463 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC15.92■□□□□ 0.14
Col4a1P02463 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC15.92■□□□□ 0.14
Col4a1P02463 Gm14267-206ENSMUST00000226870 1209 ntBASIC15.92■□□□□ 0.14
Col4a1P02463 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col4a1P02463 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col4a1P02463 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Col4a1P02463 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col4a1P02463 Gm9954-202ENSMUST00000198686 4725 ntBASIC15.91■□□□□ 0.14
Col4a1P02463 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col4a1P02463 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
Col4a1P02463 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col4a1P02463 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col4a1P02463 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col4a1P02463 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
Col4a1P02463 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col4a1P02463 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col4a1P02463 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Col4a1P02463 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col4a1P02463 Gm14999-201ENSMUST00000121039 624 ntBASIC15.91■□□□□ 0.14
Col4a1P02463 Gm26361-201ENSMUST00000158868 186 ntBASIC15.91■□□□□ 0.14
Col4a1P02463 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC15.91■□□□□ 0.14
Col4a1P02463 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC15.91■□□□□ 0.14
Col4a1P02463 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col4a1P02463 Gm8494-201ENSMUST00000178171 1233 ntBASIC15.91■□□□□ 0.14
Col4a1P02463 Gm27552-201ENSMUST00000183351 62 ntBASIC15.91■□□□□ 0.14
Col4a1P02463 Gm27844-201ENSMUST00000183613 62 ntBASIC15.91■□□□□ 0.14
Col4a1P02463 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC15.91■□□□□ 0.14
Col4a1P02463 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC15.91■□□□□ 0.14
Col4a1P02463 AC154222.2-201ENSMUST00000225848 607 ntBASIC15.91■□□□□ 0.14
Col4a1P02463 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col4a1P02463 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Col4a1P02463 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Col4a1P02463 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC15.91■□□□□ 0.14
Col4a1P02463 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col4a1P02463 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Col4a1P02463 Gm37912-201ENSMUST00000191895 3076 ntBASIC15.91■□□□□ 0.14
Col4a1P02463 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC15.91■□□□□ 0.14
Col4a1P02463 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
Col4a1P02463 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Col4a1P02463 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Col4a1P02463 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col4a1P02463 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col4a1P02463 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Col4a1P02463 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col4a1P02463 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
Col4a1P02463 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
Col4a1P02463 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col4a1P02463 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms