Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
P01852 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
P01852 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
P01852 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
P01852 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
P01852 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
P01852 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
P01852 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
P01852 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.11□□□□□ -0.47
P01852 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.11□□□□□ -0.47
P01852 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
P01852 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
P01852 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
P01852 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
P01852 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
P01852 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
P01852 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
P01852 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
P01852 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
P01852 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.1□□□□□ -0.47
P01852 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P01852 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
P01852 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
P01852 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.1□□□□□ -0.47
P01852 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P01852 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
P01852 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
P01852 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
P01852 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P01852 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
P01852 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P01852 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
P01852 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
P01852 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.1□□□□□ -0.47
P01852 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.1□□□□□ -0.47
P01852 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
P01852 Gm5687-201ENSMUST00000118252 640 ntBASIC12.1□□□□□ -0.47
P01852 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.1□□□□□ -0.47
P01852 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.1□□□□□ -0.47
P01852 Gm6152-201ENSMUST00000151704 340 ntBASIC12.1□□□□□ -0.47
P01852 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
P01852 Gm37748-201ENSMUST00000194379 1140 ntBASIC12.1□□□□□ -0.47
P01852 Gm38671-201ENSMUST00000200573 130 ntBASIC12.1□□□□□ -0.47
P01852 Itm2b-204ENSMUST00000228637 783 ntBASIC12.1□□□□□ -0.47
P01852 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
P01852 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
P01852 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
P01852 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P01852 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
P01852 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
P01852 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
P01852 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P01852 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
P01852 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
P01852 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P01852 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P01852 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P01852 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
P01852 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P01852 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.1□□□□□ -0.47
P01852 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.1□□□□□ -0.47
P01852 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
P01852 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
P01852 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P01852 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
P01852 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
P01852 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
P01852 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
P01852 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
P01852 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
P01852 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
P01852 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P01852 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
P01852 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P01852 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
P01852 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P01852 Gm13612-201ENSMUST00000119276 390 ntBASIC12.09□□□□□ -0.47
P01852 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.09□□□□□ -0.47
P01852 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.09□□□□□ -0.47
P01852 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P01852 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P01852 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P01852 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P01852 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P01852 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P01852 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P01852 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P01852 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.09□□□□□ -0.47
P01852 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.09□□□□□ -0.47
P01852 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P01852 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.09□□□□□ -0.47
P01852 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P01852 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
P01852 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
P01852 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P01852 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
P01852 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
P01852 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.08□□□□□ -0.48
P01852 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P01852 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms