Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Gm5466-201ENSMUST00000119395 1890 ntBASIC13.08□□□□□ -0.32
Pdlim1O70400 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pdlim1O70400 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pdlim1O70400 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pdlim1O70400 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pdlim1O70400 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.07□□□□□ -0.32
Pdlim1O70400 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pdlim1O70400 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pdlim1O70400 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pdlim1O70400 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pdlim1O70400 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Pdlim1O70400 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.07□□□□□ -0.32
Pdlim1O70400 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pdlim1O70400 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pdlim1O70400 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pdlim1O70400 Gm11618-201ENSMUST00000117946 267 ntBASIC13.07□□□□□ -0.32
Pdlim1O70400 Gm11803-201ENSMUST00000119966 444 ntBASIC13.07□□□□□ -0.32
Pdlim1O70400 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Pdlim1O70400 Gm27847-201ENSMUST00000183711 107 ntBASIC13.07□□□□□ -0.32
Pdlim1O70400 Gm27375-201ENSMUST00000183799 107 ntBASIC13.07□□□□□ -0.32
Pdlim1O70400 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pdlim1O70400 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Pdlim1O70400 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC13.07□□□□□ -0.32
Pdlim1O70400 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pdlim1O70400 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Pdlim1O70400 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pdlim1O70400 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pdlim1O70400 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pdlim1O70400 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pdlim1O70400 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pdlim1O70400 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pdlim1O70400 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Pdlim1O70400 Gm13050-201ENSMUST00000122149 1345 ntBASIC13.07□□□□□ -0.32
Pdlim1O70400 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pdlim1O70400 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC13.07□□□□□ -0.32
Pdlim1O70400 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pdlim1O70400 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pdlim1O70400 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Pdlim1O70400 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pdlim1O70400 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pdlim1O70400 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Pdlim1O70400 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pdlim1O70400 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pdlim1O70400 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pdlim1O70400 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pdlim1O70400 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pdlim1O70400 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pdlim1O70400 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.06□□□□□ -0.32
Pdlim1O70400 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pdlim1O70400 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Pdlim1O70400 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.06□□□□□ -0.32
Pdlim1O70400 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.06□□□□□ -0.32
Pdlim1O70400 Gm15459-201ENSMUST00000117405 1941 ntBASIC13.06□□□□□ -0.32
Pdlim1O70400 Gm8355-201ENSMUST00000177767 1941 ntBASIC13.06□□□□□ -0.32
Pdlim1O70400 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pdlim1O70400 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pdlim1O70400 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Pdlim1O70400 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pdlim1O70400 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Pdlim1O70400 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC13.06□□□□□ -0.32
Pdlim1O70400 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pdlim1O70400 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC13.06□□□□□ -0.32
Pdlim1O70400 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC13.06□□□□□ -0.32
Pdlim1O70400 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pdlim1O70400 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pdlim1O70400 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.06□□□□□ -0.32
Pdlim1O70400 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pdlim1O70400 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Pdlim1O70400 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pdlim1O70400 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Pdlim1O70400 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pdlim1O70400 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pdlim1O70400 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.06□□□□□ -0.32
Pdlim1O70400 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pdlim1O70400 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pdlim1O70400 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pdlim1O70400 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pdlim1O70400 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pdlim1O70400 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Pdlim1O70400 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC13.05□□□□□ -0.32
Pdlim1O70400 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Pdlim1O70400 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.05□□□□□ -0.32
Pdlim1O70400 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pdlim1O70400 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Pdlim1O70400 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pdlim1O70400 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pdlim1O70400 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pdlim1O70400 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Pdlim1O70400 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pdlim1O70400 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pdlim1O70400 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pdlim1O70400 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pdlim1O70400 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pdlim1O70400 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pdlim1O70400 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pdlim1O70400 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pdlim1O70400 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pdlim1O70400 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC13.05□□□□□ -0.32
Pdlim1O70400 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pdlim1O70400 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms