Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Polr1aO35134 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Polr1aO35134 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Polr1aO35134 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC19.94■□□□□ 0.78
Polr1aO35134 Gm13394-201ENSMUST00000121658 1000 ntBASIC19.94■□□□□ 0.78
Polr1aO35134 n-R5s14-201ENSMUST00000122688 107 ntBASIC19.94■□□□□ 0.78
Polr1aO35134 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC19.94■□□□□ 0.78
Polr1aO35134 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC19.94■□□□□ 0.78
Polr1aO35134 Gm5616-201ENSMUST00000165252 384 ntBASIC19.94■□□□□ 0.78
Polr1aO35134 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Polr1aO35134 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC19.94■□□□□ 0.78
Polr1aO35134 Gm8741-201ENSMUST00000174736 384 ntBASIC19.94■□□□□ 0.78
Polr1aO35134 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC19.94■□□□□ 0.78
Polr1aO35134 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Polr1aO35134 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Polr1aO35134 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Polr1aO35134 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Polr1aO35134 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Polr1aO35134 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Polr1aO35134 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Polr1aO35134 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Polr1aO35134 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Polr1aO35134 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Polr1aO35134 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Polr1aO35134 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Polr1aO35134 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Polr1aO35134 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC19.93■□□□□ 0.78
Polr1aO35134 Gm5523-201ENSMUST00000180415 997 ntBASIC19.93■□□□□ 0.78
Polr1aO35134 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC19.93■□□□□ 0.78
Polr1aO35134 AU022133-201ENSMUST00000200601 873 ntBASIC19.93■□□□□ 0.78
Polr1aO35134 Gm44100-201ENSMUST00000204329 436 ntBASIC19.93■□□□□ 0.78
Polr1aO35134 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC19.93■□□□□ 0.78
Polr1aO35134 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Polr1aO35134 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Polr1aO35134 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Polr1aO35134 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Polr1aO35134 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Polr1aO35134 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Polr1aO35134 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Polr1aO35134 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Polr1aO35134 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Polr1aO35134 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Polr1aO35134 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Polr1aO35134 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Polr1aO35134 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC19.93■□□□□ 0.78
Polr1aO35134 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
Polr1aO35134 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC19.93■□□□□ 0.78
Polr1aO35134 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Polr1aO35134 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC19.93■□□□□ 0.78
Polr1aO35134 Gm45770-201ENSMUST00000212105 616 ntBASIC19.93■□□□□ 0.78
Polr1aO35134 Gm5369-201ENSMUST00000217499 588 ntBASIC19.93■□□□□ 0.78
Polr1aO35134 Gm10076-201ENSMUST00000073238 384 ntBASIC19.93■□□□□ 0.78
Polr1aO35134 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Polr1aO35134 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Polr1aO35134 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Polr1aO35134 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Polr1aO35134 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Polr1aO35134 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Polr1aO35134 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC19.92■□□□□ 0.78
Polr1aO35134 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC19.92■□□□□ 0.78
Polr1aO35134 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC19.92■□□□□ 0.78
Polr1aO35134 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC19.92■□□□□ 0.78
Polr1aO35134 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC19.92■□□□□ 0.78
Polr1aO35134 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC19.92■□□□□ 0.78
Polr1aO35134 Gm42997-202ENSMUST00000200321 985 ntBASIC19.92■□□□□ 0.78
Polr1aO35134 Gm18556-201ENSMUST00000219748 1031 ntBASIC19.92■□□□□ 0.78
Polr1aO35134 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Polr1aO35134 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Polr1aO35134 Zkscan3-208ENSMUST00000224820 5398 ntBASIC19.92■□□□□ 0.78
Polr1aO35134 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Polr1aO35134 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Polr1aO35134 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Polr1aO35134 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Polr1aO35134 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Polr1aO35134 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Polr1aO35134 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Polr1aO35134 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Polr1aO35134 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
Polr1aO35134 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Polr1aO35134 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Polr1aO35134 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC19.91■□□□□ 0.78
Polr1aO35134 Gm13045-201ENSMUST00000119019 712 ntBASIC19.91■□□□□ 0.78
Polr1aO35134 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC19.91■□□□□ 0.78
Polr1aO35134 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC19.91■□□□□ 0.78
Polr1aO35134 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Polr1aO35134 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC19.91■□□□□ 0.78
Polr1aO35134 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Polr1aO35134 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Polr1aO35134 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC19.91■□□□□ 0.78
Polr1aO35134 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Polr1aO35134 Sorbs3-204ENSMUST00000227929 2460 ntBASIC19.91■□□□□ 0.78
Polr1aO35134 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC19.91■□□□□ 0.78
Polr1aO35134 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Polr1aO35134 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Polr1aO35134 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
Polr1aO35134 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Polr1aO35134 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC19.91■□□□□ 0.78
Polr1aO35134 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC19.91■□□□□ 0.78
Polr1aO35134 Gm6335-201ENSMUST00000118081 1194 ntBASIC19.9■□□□□ 0.78
Polr1aO35134 Gm12616-201ENSMUST00000118594 382 ntBASIC19.9■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms