Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Trav3n-3A0A0G2JEM0 AC131586.3-201ENSMUST00000228355 1367 ntBASIC10.02□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC10.02□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Gm6226-201ENSMUST00000117765 1146 ntBASIC10.02□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Gm6539-201ENSMUST00000119157 1064 ntBASIC10.02□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Gm11025-201ENSMUST00000140773 466 ntBASIC10.02□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Trav3n-3A0A0G2JEM0 AA543401-201ENSMUST00000164248 1269 ntBASIC10.02□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC10.02□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Gm2445-201ENSMUST00000182798 989 ntBASIC10.02□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Gm38225-201ENSMUST00000194001 393 ntBASIC10.02□□□□□ -0.81
Trav3n-3A0A0G2JEM0 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC10.02□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC10.02□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav3n-3A0A0G2JEM0 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Gm10819-201ENSMUST00000099988 561 ntBASIC10.02□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC10.02□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Gm37849-201ENSMUST00000194722 1881 ntBASIC10.02□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3n-3A0A0G2JEM0 AC154725.1-201ENSMUST00000224826 1961 ntBASIC10.01□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC10.01□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Gm12020-201ENSMUST00000119030 2042 ntBASIC10.01□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Gm36957-201ENSMUST00000192982 2824 ntBASIC10.01□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC10.01□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC10.01□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC10.01□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC10.01□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC10.01□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC10.01□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Gm18057-201ENSMUST00000208220 503 ntBASIC10.01□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC10.01□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC10.01□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3n-3A0A0G2JEM0 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC10.01□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 86.9 ms