Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC13.23□□□□□ -0.29
Scn8aQ9WTU3 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Scn8aQ9WTU3 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Scn8aQ9WTU3 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.23□□□□□ -0.29
Scn8aQ9WTU3 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn8aQ9WTU3 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
Scn8aQ9WTU3 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn8aQ9WTU3 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Scn8aQ9WTU3 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Scn8aQ9WTU3 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn8aQ9WTU3 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.23□□□□□ -0.29
Scn8aQ9WTU3 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn8aQ9WTU3 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.23□□□□□ -0.29
Scn8aQ9WTU3 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC13.23□□□□□ -0.29
Scn8aQ9WTU3 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn8aQ9WTU3 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Scn8aQ9WTU3 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Scn8aQ9WTU3 Gm3287-205ENSMUST00000228893 1332 ntBASIC13.23□□□□□ -0.29
Scn8aQ9WTU3 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn8aQ9WTU3 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn8aQ9WTU3 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn8aQ9WTU3 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn8aQ9WTU3 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Scn8aQ9WTU3 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn8aQ9WTU3 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn8aQ9WTU3 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn8aQ9WTU3 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Scn8aQ9WTU3 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Scn8aQ9WTU3 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn8aQ9WTU3 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn8aQ9WTU3 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn8aQ9WTU3 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn8aQ9WTU3 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn8aQ9WTU3 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn8aQ9WTU3 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn8aQ9WTU3 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Scn8aQ9WTU3 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC13.22□□□□□ -0.29
Scn8aQ9WTU3 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Scn8aQ9WTU3 Gm43416-201ENSMUST00000201916 1015 ntBASIC13.22□□□□□ -0.29
Scn8aQ9WTU3 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC13.22□□□□□ -0.29
Scn8aQ9WTU3 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn8aQ9WTU3 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Scn8aQ9WTU3 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Scn8aQ9WTU3 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Scn8aQ9WTU3 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn8aQ9WTU3 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn8aQ9WTU3 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13.22□□□□□ -0.29
Scn8aQ9WTU3 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Scn8aQ9WTU3 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Scn8aQ9WTU3 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.22□□□□□ -0.29
Scn8aQ9WTU3 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.22□□□□□ -0.29
Scn8aQ9WTU3 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn8aQ9WTU3 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Scn8aQ9WTU3 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Scn8aQ9WTU3 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.22□□□□□ -0.29
Scn8aQ9WTU3 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC13.22□□□□□ -0.29
Scn8aQ9WTU3 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn8aQ9WTU3 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn8aQ9WTU3 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.22□□□□□ -0.29
Scn8aQ9WTU3 Grk6-205ENSMUST00000224653 2976 ntBASIC13.22□□□□□ -0.29
Scn8aQ9WTU3 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Scn8aQ9WTU3 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn8aQ9WTU3 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Scn8aQ9WTU3 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC13.21□□□□□ -0.29
Scn8aQ9WTU3 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Scn8aQ9WTU3 Gm8099-201ENSMUST00000200510 742 ntBASIC13.21□□□□□ -0.29
Scn8aQ9WTU3 Gm7046-201ENSMUST00000221351 977 ntBASIC13.21□□□□□ -0.29
Scn8aQ9WTU3 AC138604.1-201ENSMUST00000226969 739 ntBASIC13.21□□□□□ -0.29
Scn8aQ9WTU3 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scn8aQ9WTU3 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Scn8aQ9WTU3 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scn8aQ9WTU3 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Scn8aQ9WTU3 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scn8aQ9WTU3 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scn8aQ9WTU3 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Scn8aQ9WTU3 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.21□□□□□ -0.29
Scn8aQ9WTU3 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Scn8aQ9WTU3 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scn8aQ9WTU3 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scn8aQ9WTU3 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Scn8aQ9WTU3 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Scn8aQ9WTU3 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scn8aQ9WTU3 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scn8aQ9WTU3 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scn8aQ9WTU3 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.21□□□□□ -0.29
Scn8aQ9WTU3 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Scn8aQ9WTU3 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Scn8aQ9WTU3 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC13.21□□□□□ -0.29
Scn8aQ9WTU3 Gm25043-201ENSMUST00000158604 212 ntBASIC13.21□□□□□ -0.29
Scn8aQ9WTU3 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC13.21□□□□□ -0.29
Scn8aQ9WTU3 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC13.21□□□□□ -0.29
Scn8aQ9WTU3 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC13.21□□□□□ -0.29
Scn8aQ9WTU3 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC13.21□□□□□ -0.29
Scn8aQ9WTU3 Gm18916-201ENSMUST00000198264 1246 ntBASIC13.21□□□□□ -0.29
Scn8aQ9WTU3 Gm43758-201ENSMUST00000199500 367 ntBASIC13.21□□□□□ -0.29
Scn8aQ9WTU3 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Scn8aQ9WTU3 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC13.21□□□□□ -0.29
Scn8aQ9WTU3 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scn8aQ9WTU3 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scn8aQ9WTU3 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms