Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trim16Q99PP9 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim16Q99PP9 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim16Q99PP9 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trim16Q99PP9 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trim16Q99PP9 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.98□□□□□ -0.33
Trim16Q99PP9 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim16Q99PP9 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trim16Q99PP9 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim16Q99PP9 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.98□□□□□ -0.33
Trim16Q99PP9 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim16Q99PP9 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim16Q99PP9 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim16Q99PP9 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trim16Q99PP9 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trim16Q99PP9 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trim16Q99PP9 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim16Q99PP9 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim16Q99PP9 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim16Q99PP9 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim16Q99PP9 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trim16Q99PP9 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trim16Q99PP9 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim16Q99PP9 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Trim16Q99PP9 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim16Q99PP9 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.97□□□□□ -0.33
Trim16Q99PP9 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim16Q99PP9 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim16Q99PP9 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.97□□□□□ -0.33
Trim16Q99PP9 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim16Q99PP9 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim16Q99PP9 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim16Q99PP9 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.97□□□□□ -0.33
Trim16Q99PP9 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trim16Q99PP9 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim16Q99PP9 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim16Q99PP9 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim16Q99PP9 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim16Q99PP9 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC12.97□□□□□ -0.33
Trim16Q99PP9 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC12.97□□□□□ -0.33
Trim16Q99PP9 Gm5279-201ENSMUST00000199575 745 ntBASIC12.97□□□□□ -0.33
Trim16Q99PP9 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trim16Q99PP9 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim16Q99PP9 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim16Q99PP9 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim16Q99PP9 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim16Q99PP9 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim16Q99PP9 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim16Q99PP9 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.97□□□□□ -0.33
Trim16Q99PP9 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim16Q99PP9 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.97□□□□□ -0.33
Trim16Q99PP9 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim16Q99PP9 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim16Q99PP9 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim16Q99PP9 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trim16Q99PP9 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trim16Q99PP9 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trim16Q99PP9 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim16Q99PP9 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim16Q99PP9 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim16Q99PP9 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.97□□□□□ -0.33
Trim16Q99PP9 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim16Q99PP9 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim16Q99PP9 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim16Q99PP9 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim16Q99PP9 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Trim16Q99PP9 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim16Q99PP9 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trim16Q99PP9 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.96□□□□□ -0.33
Trim16Q99PP9 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.96□□□□□ -0.33
Trim16Q99PP9 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim16Q99PP9 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
Trim16Q99PP9 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim16Q99PP9 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim16Q99PP9 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim16Q99PP9 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim16Q99PP9 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.96□□□□□ -0.33
Trim16Q99PP9 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim16Q99PP9 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim16Q99PP9 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim16Q99PP9 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Trim16Q99PP9 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Trim16Q99PP9 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.96□□□□□ -0.33
Trim16Q99PP9 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim16Q99PP9 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
Trim16Q99PP9 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim16Q99PP9 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim16Q99PP9 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.96□□□□□ -0.33
Trim16Q99PP9 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Trim16Q99PP9 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
Trim16Q99PP9 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC12.96□□□□□ -0.33
Trim16Q99PP9 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim16Q99PP9 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim16Q99PP9 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC12.96□□□□□ -0.33
Trim16Q99PP9 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim16Q99PP9 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim16Q99PP9 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim16Q99PP9 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Trim16Q99PP9 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.96□□□□□ -0.34
Trim16Q99PP9 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms