Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim33Q99PP7 Gm18307-201ENSMUST00000206864 949 ntBASIC13.2□□□□□ -0.3
Trim33Q99PP7 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC13.2□□□□□ -0.3
Trim33Q99PP7 AC156560.2-201ENSMUST00000221232 264 ntBASIC13.2□□□□□ -0.3
Trim33Q99PP7 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim33Q99PP7 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim33Q99PP7 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.2□□□□□ -0.3
Trim33Q99PP7 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim33Q99PP7 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim33Q99PP7 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim33Q99PP7 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Trim33Q99PP7 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim33Q99PP7 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.2□□□□□ -0.3
Trim33Q99PP7 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim33Q99PP7 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim33Q99PP7 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.2□□□□□ -0.3
Trim33Q99PP7 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim33Q99PP7 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim33Q99PP7 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim33Q99PP7 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim33Q99PP7 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trim33Q99PP7 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim33Q99PP7 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim33Q99PP7 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim33Q99PP7 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim33Q99PP7 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim33Q99PP7 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim33Q99PP7 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
Trim33Q99PP7 Paupar-201ENSMUST00000194826 3482 ntBASIC13.19□□□□□ -0.3
Trim33Q99PP7 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim33Q99PP7 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim33Q99PP7 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim33Q99PP7 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim33Q99PP7 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim33Q99PP7 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim33Q99PP7 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim33Q99PP7 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim33Q99PP7 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim33Q99PP7 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim33Q99PP7 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim33Q99PP7 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim33Q99PP7 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim33Q99PP7 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim33Q99PP7 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trim33Q99PP7 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Trim33Q99PP7 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC13.19□□□□□ -0.3
Trim33Q99PP7 H2-Pa-201ENSMUST00000182803 626 ntBASIC13.19□□□□□ -0.3
Trim33Q99PP7 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC13.19□□□□□ -0.3
Trim33Q99PP7 Gm18018-201ENSMUST00000198273 408 ntBASIC13.19□□□□□ -0.3
Trim33Q99PP7 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC13.19□□□□□ -0.3
Trim33Q99PP7 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim33Q99PP7 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim33Q99PP7 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim33Q99PP7 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim33Q99PP7 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim33Q99PP7 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim33Q99PP7 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim33Q99PP7 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Trim33Q99PP7 AC139350.1-201ENSMUST00000227064 1594 ntBASIC13.19□□□□□ -0.3
Trim33Q99PP7 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim33Q99PP7 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.19□□□□□ -0.3
Trim33Q99PP7 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.19□□□□□ -0.3
Trim33Q99PP7 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim33Q99PP7 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim33Q99PP7 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim33Q99PP7 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim33Q99PP7 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim33Q99PP7 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim33Q99PP7 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim33Q99PP7 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim33Q99PP7 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim33Q99PP7 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim33Q99PP7 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim33Q99PP7 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim33Q99PP7 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim33Q99PP7 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim33Q99PP7 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.18□□□□□ -0.3
Trim33Q99PP7 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim33Q99PP7 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim33Q99PP7 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim33Q99PP7 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim33Q99PP7 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim33Q99PP7 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC13.18□□□□□ -0.3
Trim33Q99PP7 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim33Q99PP7 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim33Q99PP7 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Trim33Q99PP7 Gm12537-201ENSMUST00000119266 1002 ntBASIC13.18□□□□□ -0.3
Trim33Q99PP7 Gm12070-201ENSMUST00000119551 1002 ntBASIC13.18□□□□□ -0.3
Trim33Q99PP7 Gm12671-201ENSMUST00000119978 1002 ntBASIC13.18□□□□□ -0.3
Trim33Q99PP7 Gm13292-201ENSMUST00000120014 1000 ntBASIC13.18□□□□□ -0.3
Trim33Q99PP7 Gm14928-201ENSMUST00000120198 477 ntBASIC13.18□□□□□ -0.3
Trim33Q99PP7 Gm12403-201ENSMUST00000121384 959 ntBASIC13.18□□□□□ -0.3
Trim33Q99PP7 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim33Q99PP7 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC13.18□□□□□ -0.3
Trim33Q99PP7 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim33Q99PP7 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC13.18□□□□□ -0.3
Trim33Q99PP7 Gm10359-201ENSMUST00000180167 1002 ntBASIC13.18□□□□□ -0.3
Trim33Q99PP7 Gm12033-201ENSMUST00000180654 1002 ntBASIC13.18□□□□□ -0.3
Trim33Q99PP7 Gm5559-201ENSMUST00000180755 1002 ntBASIC13.18□□□□□ -0.3
Trim33Q99PP7 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms