Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
Chmp1b1Q99LU0 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.56□□□□□ -0.4
Chmp1b1Q99LU0 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp1b1Q99LU0 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp1b1Q99LU0 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Chmp1b1Q99LU0 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.56□□□□□ -0.4
Chmp1b1Q99LU0 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp1b1Q99LU0 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp1b1Q99LU0 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp1b1Q99LU0 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp1b1Q99LU0 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp1b1Q99LU0 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp1b1Q99LU0 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC12.56□□□□□ -0.4
Chmp1b1Q99LU0 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp1b1Q99LU0 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Chmp1b1Q99LU0 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Chmp1b1Q99LU0 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp1b1Q99LU0 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp1b1Q99LU0 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Chmp1b1Q99LU0 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chmp1b1Q99LU0 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chmp1b1Q99LU0 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chmp1b1Q99LU0 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.55□□□□□ -0.4
Chmp1b1Q99LU0 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chmp1b1Q99LU0 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chmp1b1Q99LU0 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chmp1b1Q99LU0 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chmp1b1Q99LU0 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chmp1b1Q99LU0 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chmp1b1Q99LU0 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chmp1b1Q99LU0 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chmp1b1Q99LU0 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chmp1b1Q99LU0 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chmp1b1Q99LU0 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chmp1b1Q99LU0 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chmp1b1Q99LU0 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC12.55□□□□□ -0.4
Chmp1b1Q99LU0 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Chmp1b1Q99LU0 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chmp1b1Q99LU0 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Chmp1b1Q99LU0 AC135669.1-201ENSMUST00000213585 412 ntBASIC12.55□□□□□ -0.4
Chmp1b1Q99LU0 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Chmp1b1Q99LU0 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Chmp1b1Q99LU0 Arhgef33-209ENSMUST00000225223 714 ntBASIC12.55□□□□□ -0.4
Chmp1b1Q99LU0 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chmp1b1Q99LU0 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chmp1b1Q99LU0 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Chmp1b1Q99LU0 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chmp1b1Q99LU0 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Chmp1b1Q99LU0 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chmp1b1Q99LU0 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chmp1b1Q99LU0 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Chmp1b1Q99LU0 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chmp1b1Q99LU0 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Chmp1b1Q99LU0 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chmp1b1Q99LU0 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Chmp1b1Q99LU0 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Chmp1b1Q99LU0 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chmp1b1Q99LU0 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chmp1b1Q99LU0 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chmp1b1Q99LU0 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chmp1b1Q99LU0 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chmp1b1Q99LU0 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Chmp1b1Q99LU0 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Chmp1b1Q99LU0 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chmp1b1Q99LU0 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chmp1b1Q99LU0 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chmp1b1Q99LU0 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chmp1b1Q99LU0 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chmp1b1Q99LU0 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chmp1b1Q99LU0 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chmp1b1Q99LU0 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.54□□□□□ -0.4
Chmp1b1Q99LU0 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chmp1b1Q99LU0 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Chmp1b1Q99LU0 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Chmp1b1Q99LU0 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Chmp1b1Q99LU0 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC12.54□□□□□ -0.4
Chmp1b1Q99LU0 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC12.54□□□□□ -0.4
Chmp1b1Q99LU0 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC12.54□□□□□ -0.4
Chmp1b1Q99LU0 Gm15321-201ENSMUST00000121290 288 ntBASIC12.54□□□□□ -0.4
Chmp1b1Q99LU0 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chmp1b1Q99LU0 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Chmp1b1Q99LU0 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Chmp1b1Q99LU0 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.54□□□□□ -0.4
Chmp1b1Q99LU0 Gm21854-201ENSMUST00000179901 471 ntBASIC12.54□□□□□ -0.4
Chmp1b1Q99LU0 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Chmp1b1Q99LU0 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Chmp1b1Q99LU0 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.54□□□□□ -0.4
Chmp1b1Q99LU0 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.54□□□□□ -0.4
Chmp1b1Q99LU0 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Chmp1b1Q99LU0 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chmp1b1Q99LU0 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chmp1b1Q99LU0 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.54□□□□□ -0.4
Chmp1b1Q99LU0 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chmp1b1Q99LU0 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.54□□□□□ -0.4
Chmp1b1Q99LU0 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chmp1b1Q99LU0 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chmp1b1Q99LU0 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Chmp1b1Q99LU0 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Chmp1b1Q99LU0 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Chmp1b1Q99LU0 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms