Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC15.64■□□□□ 0.09
Atf7Q8R0S1 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Atf7Q8R0S1 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Atf7Q8R0S1 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Atf7Q8R0S1 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC15.64■□□□□ 0.09
Atf7Q8R0S1 Gm18018-201ENSMUST00000198273 408 ntBASIC15.64■□□□□ 0.09
Atf7Q8R0S1 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC15.64■□□□□ 0.09
Atf7Q8R0S1 AC154276.1-201ENSMUST00000228874 1299 ntBASIC15.64■□□□□ 0.09
Atf7Q8R0S1 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Atf7Q8R0S1 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Atf7Q8R0S1 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Atf7Q8R0S1 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Atf7Q8R0S1 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Atf7Q8R0S1 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Atf7Q8R0S1 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC15.64■□□□□ 0.09
Atf7Q8R0S1 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC15.64■□□□□ 0.09
Atf7Q8R0S1 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Atf7Q8R0S1 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Atf7Q8R0S1 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Atf7Q8R0S1 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Atf7Q8R0S1 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC15.64■□□□□ 0.09
Atf7Q8R0S1 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Atf7Q8R0S1 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC15.64■□□□□ 0.09
Atf7Q8R0S1 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Atf7Q8R0S1 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Atf7Q8R0S1 Gm7002-201ENSMUST00000221386 2165 ntBASIC15.63■□□□□ 0.09
Atf7Q8R0S1 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
Atf7Q8R0S1 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Atf7Q8R0S1 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Atf7Q8R0S1 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Atf7Q8R0S1 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Atf7Q8R0S1 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Atf7Q8R0S1 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Atf7Q8R0S1 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Atf7Q8R0S1 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Atf7Q8R0S1 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Atf7Q8R0S1 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Atf7Q8R0S1 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Atf7Q8R0S1 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC15.63■□□□□ 0.09
Atf7Q8R0S1 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Atf7Q8R0S1 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC15.63■□□□□ 0.09
Atf7Q8R0S1 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Atf7Q8R0S1 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC15.63■□□□□ 0.09
Atf7Q8R0S1 AC125117.1-201ENSMUST00000228121 468 ntBASIC15.63■□□□□ 0.09
Atf7Q8R0S1 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Atf7Q8R0S1 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Atf7Q8R0S1 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC15.63■□□□□ 0.09
Atf7Q8R0S1 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Atf7Q8R0S1 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Atf7Q8R0S1 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Atf7Q8R0S1 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Atf7Q8R0S1 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Atf7Q8R0S1 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC15.63■□□□□ 0.09
Atf7Q8R0S1 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Atf7Q8R0S1 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Atf7Q8R0S1 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Atf7Q8R0S1 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Atf7Q8R0S1 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Atf7Q8R0S1 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Atf7Q8R0S1 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Atf7Q8R0S1 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Atf7Q8R0S1 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Atf7Q8R0S1 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Atf7Q8R0S1 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Atf7Q8R0S1 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Atf7Q8R0S1 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC15.62■□□□□ 0.09
Atf7Q8R0S1 Gm27701-201ENSMUST00000184498 110 ntBASIC15.62■□□□□ 0.09
Atf7Q8R0S1 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Atf7Q8R0S1 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Atf7Q8R0S1 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Atf7Q8R0S1 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Atf7Q8R0S1 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Atf7Q8R0S1 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Atf7Q8R0S1 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Atf7Q8R0S1 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Atf7Q8R0S1 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Atf7Q8R0S1 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Atf7Q8R0S1 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Atf7Q8R0S1 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC15.62■□□□□ 0.09
Atf7Q8R0S1 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Atf7Q8R0S1 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
Atf7Q8R0S1 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Atf7Q8R0S1 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Atf7Q8R0S1 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Atf7Q8R0S1 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
Atf7Q8R0S1 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Atf7Q8R0S1 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Atf7Q8R0S1 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
Atf7Q8R0S1 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Atf7Q8R0S1 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Atf7Q8R0S1 Gm14350-201ENSMUST00000116642 640 ntBASIC15.61■□□□□ 0.09
Atf7Q8R0S1 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC15.61■□□□□ 0.09
Atf7Q8R0S1 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC15.61■□□□□ 0.09
Atf7Q8R0S1 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Atf7Q8R0S1 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC15.61■□□□□ 0.09
Atf7Q8R0S1 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC15.61■□□□□ 0.09
Atf7Q8R0S1 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC15.61■□□□□ 0.09
Atf7Q8R0S1 Gm8463-201ENSMUST00000208573 613 ntBASIC15.61■□□□□ 0.09
Atf7Q8R0S1 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Atf7Q8R0S1 Gm18473-201ENSMUST00000220543 868 ntBASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms