Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Sf3a1Q8K4Z5 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC16.22■□□□□ 0.19
Sf3a1Q8K4Z5 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Sf3a1Q8K4Z5 Gm42929-201ENSMUST00000198374 1286 ntBASIC16.22■□□□□ 0.19
Sf3a1Q8K4Z5 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC16.22■□□□□ 0.19
Sf3a1Q8K4Z5 AC173210.1-201ENSMUST00000222341 1131 ntBASIC16.22■□□□□ 0.19
Sf3a1Q8K4Z5 AC134335.2-201ENSMUST00000227660 440 ntBASIC16.22■□□□□ 0.19
Sf3a1Q8K4Z5 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sf3a1Q8K4Z5 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sf3a1Q8K4Z5 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sf3a1Q8K4Z5 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sf3a1Q8K4Z5 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sf3a1Q8K4Z5 Gm38346-201ENSMUST00000192379 2639 ntBASIC16.22■□□□□ 0.19
Sf3a1Q8K4Z5 Gm18630-201ENSMUST00000222109 1397 ntBASIC16.22■□□□□ 0.19
Sf3a1Q8K4Z5 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Sf3a1Q8K4Z5 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sf3a1Q8K4Z5 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sf3a1Q8K4Z5 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sf3a1Q8K4Z5 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Sf3a1Q8K4Z5 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Sf3a1Q8K4Z5 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sf3a1Q8K4Z5 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sf3a1Q8K4Z5 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Sf3a1Q8K4Z5 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sf3a1Q8K4Z5 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Sf3a1Q8K4Z5 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sf3a1Q8K4Z5 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sf3a1Q8K4Z5 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC16.21■□□□□ 0.19
Sf3a1Q8K4Z5 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC16.21■□□□□ 0.19
Sf3a1Q8K4Z5 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sf3a1Q8K4Z5 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sf3a1Q8K4Z5 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC16.21■□□□□ 0.19
Sf3a1Q8K4Z5 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Sf3a1Q8K4Z5 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sf3a1Q8K4Z5 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC16.21■□□□□ 0.19
Sf3a1Q8K4Z5 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Sf3a1Q8K4Z5 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC16.21■□□□□ 0.19
Sf3a1Q8K4Z5 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sf3a1Q8K4Z5 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sf3a1Q8K4Z5 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC16.21■□□□□ 0.19
Sf3a1Q8K4Z5 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sf3a1Q8K4Z5 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sf3a1Q8K4Z5 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sf3a1Q8K4Z5 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Sf3a1Q8K4Z5 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sf3a1Q8K4Z5 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Sf3a1Q8K4Z5 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sf3a1Q8K4Z5 Gm44065-201ENSMUST00000203184 3527 ntBASIC16.21■□□□□ 0.19
Sf3a1Q8K4Z5 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Sf3a1Q8K4Z5 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Sf3a1Q8K4Z5 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Sf3a1Q8K4Z5 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sf3a1Q8K4Z5 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sf3a1Q8K4Z5 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Sf3a1Q8K4Z5 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sf3a1Q8K4Z5 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sf3a1Q8K4Z5 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
Sf3a1Q8K4Z5 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sf3a1Q8K4Z5 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sf3a1Q8K4Z5 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Sf3a1Q8K4Z5 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC16.2■□□□□ 0.18
Sf3a1Q8K4Z5 Gm8598-201ENSMUST00000221184 836 ntBASIC16.2■□□□□ 0.18
Sf3a1Q8K4Z5 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sf3a1Q8K4Z5 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Sf3a1Q8K4Z5 Gm10012-201ENSMUST00000078252 192 ntBASIC16.2■□□□□ 0.18
Sf3a1Q8K4Z5 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sf3a1Q8K4Z5 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sf3a1Q8K4Z5 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Sf3a1Q8K4Z5 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC16.2■□□□□ 0.18
Sf3a1Q8K4Z5 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sf3a1Q8K4Z5 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sf3a1Q8K4Z5 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC16.2■□□□□ 0.18
Sf3a1Q8K4Z5 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sf3a1Q8K4Z5 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Sf3a1Q8K4Z5 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Sf3a1Q8K4Z5 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sf3a1Q8K4Z5 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sf3a1Q8K4Z5 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sf3a1Q8K4Z5 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sf3a1Q8K4Z5 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sf3a1Q8K4Z5 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sf3a1Q8K4Z5 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sf3a1Q8K4Z5 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sf3a1Q8K4Z5 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Sf3a1Q8K4Z5 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sf3a1Q8K4Z5 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sf3a1Q8K4Z5 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sf3a1Q8K4Z5 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC16.19■□□□□ 0.18
Sf3a1Q8K4Z5 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Sf3a1Q8K4Z5 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sf3a1Q8K4Z5 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sf3a1Q8K4Z5 Gm14350-201ENSMUST00000116642 640 ntBASIC16.19■□□□□ 0.18
Sf3a1Q8K4Z5 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Sf3a1Q8K4Z5 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sf3a1Q8K4Z5 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC16.19■□□□□ 0.18
Sf3a1Q8K4Z5 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC16.19■□□□□ 0.18
Sf3a1Q8K4Z5 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Sf3a1Q8K4Z5 Gm8652-201ENSMUST00000181363 964 ntBASIC16.19■□□□□ 0.18
Sf3a1Q8K4Z5 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC16.19■□□□□ 0.18
Sf3a1Q8K4Z5 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms