Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ddx54Q8K4L0 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC17.21■□□□□ 0.35
Ddx54Q8K4L0 Rprl1-202ENSMUST00000198476 238 ntBASIC17.21■□□□□ 0.35
Ddx54Q8K4L0 Gm45691-201ENSMUST00000206905 1120 ntBASIC17.21■□□□□ 0.35
Ddx54Q8K4L0 AC159103.1-201ENSMUST00000228325 429 ntBASIC17.21■□□□□ 0.35
Ddx54Q8K4L0 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ddx54Q8K4L0 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ddx54Q8K4L0 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Ddx54Q8K4L0 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ddx54Q8K4L0 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ddx54Q8K4L0 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ddx54Q8K4L0 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ddx54Q8K4L0 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC17.21■□□□□ 0.34
Ddx54Q8K4L0 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Ddx54Q8K4L0 Gm3287-205ENSMUST00000228893 1332 ntBASIC17.21■□□□□ 0.34
Ddx54Q8K4L0 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ddx54Q8K4L0 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Ddx54Q8K4L0 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ddx54Q8K4L0 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ddx54Q8K4L0 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ddx54Q8K4L0 Gm9856-201ENSMUST00000217077 2578 ntBASIC17.2■□□□□ 0.34
Ddx54Q8K4L0 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ddx54Q8K4L0 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Ddx54Q8K4L0 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ddx54Q8K4L0 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC17.2■□□□□ 0.34
Ddx54Q8K4L0 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ddx54Q8K4L0 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ddx54Q8K4L0 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC17.2■□□□□ 0.34
Ddx54Q8K4L0 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC17.2■□□□□ 0.34
Ddx54Q8K4L0 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ddx54Q8K4L0 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC17.2■□□□□ 0.34
Ddx54Q8K4L0 Gm9540-201ENSMUST00000188230 478 ntBASIC17.2■□□□□ 0.34
Ddx54Q8K4L0 AC154222.2-201ENSMUST00000225848 607 ntBASIC17.2■□□□□ 0.34
Ddx54Q8K4L0 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ddx54Q8K4L0 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Ddx54Q8K4L0 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ddx54Q8K4L0 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ddx54Q8K4L0 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ddx54Q8K4L0 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Ddx54Q8K4L0 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ddx54Q8K4L0 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC17.2■□□□□ 0.34
Ddx54Q8K4L0 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ddx54Q8K4L0 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ddx54Q8K4L0 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ddx54Q8K4L0 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ddx54Q8K4L0 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC17.2■□□□□ 0.34
Ddx54Q8K4L0 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ddx54Q8K4L0 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Ddx54Q8K4L0 Gm44999-201ENSMUST00000207456 1493 ntBASIC17.19■□□□□ 0.34
Ddx54Q8K4L0 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ddx54Q8K4L0 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ddx54Q8K4L0 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ddx54Q8K4L0 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ddx54Q8K4L0 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ddx54Q8K4L0 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ddx54Q8K4L0 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC17.19■□□□□ 0.34
Ddx54Q8K4L0 Gm14704-201ENSMUST00000120300 874 ntBASIC17.19■□□□□ 0.34
Ddx54Q8K4L0 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC17.19■□□□□ 0.34
Ddx54Q8K4L0 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ddx54Q8K4L0 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ddx54Q8K4L0 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Ddx54Q8K4L0 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC17.19■□□□□ 0.34
Ddx54Q8K4L0 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC17.19■□□□□ 0.34
Ddx54Q8K4L0 Gm17812-201ENSMUST00000204935 318 ntBASIC17.19■□□□□ 0.34
Ddx54Q8K4L0 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC17.19■□□□□ 0.34
Ddx54Q8K4L0 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC17.19■□□□□ 0.34
Ddx54Q8K4L0 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC17.19■□□□□ 0.34
Ddx54Q8K4L0 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC17.19■□□□□ 0.34
Ddx54Q8K4L0 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC17.19■□□□□ 0.34
Ddx54Q8K4L0 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC17.19■□□□□ 0.34
Ddx54Q8K4L0 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Ddx54Q8K4L0 Gm10179-201ENSMUST00000086233 688 ntBASIC17.19■□□□□ 0.34
Ddx54Q8K4L0 Gm37827-201ENSMUST00000194486 1542 ntBASIC17.19■□□□□ 0.34
Ddx54Q8K4L0 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ddx54Q8K4L0 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ddx54Q8K4L0 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ddx54Q8K4L0 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Ddx54Q8K4L0 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ddx54Q8K4L0 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ddx54Q8K4L0 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ddx54Q8K4L0 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ddx54Q8K4L0 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
Ddx54Q8K4L0 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ddx54Q8K4L0 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC17.18■□□□□ 0.34
Ddx54Q8K4L0 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ddx54Q8K4L0 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC17.18■□□□□ 0.34
Ddx54Q8K4L0 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC17.18■□□□□ 0.34
Ddx54Q8K4L0 Gm5778-201ENSMUST00000171003 1072 ntBASIC17.18■□□□□ 0.34
Ddx54Q8K4L0 Gm7600-201ENSMUST00000209657 785 ntBASIC17.18■□□□□ 0.34
Ddx54Q8K4L0 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC17.18■□□□□ 0.34
Ddx54Q8K4L0 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ddx54Q8K4L0 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ddx54Q8K4L0 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ddx54Q8K4L0 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Ddx54Q8K4L0 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ddx54Q8K4L0 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ddx54Q8K4L0 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ddx54Q8K4L0 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
Ddx54Q8K4L0 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ddx54Q8K4L0 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms