Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rtn1Q8K0T0 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtn1Q8K0T0 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rtn1Q8K0T0 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rtn1Q8K0T0 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Rtn1Q8K0T0 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rtn1Q8K0T0 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC15.3■□□□□ 0.04
Rtn1Q8K0T0 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC15.3■□□□□ 0.04
Rtn1Q8K0T0 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC15.3■□□□□ 0.04
Rtn1Q8K0T0 Gm6244-201ENSMUST00000178732 841 ntBASIC15.3■□□□□ 0.04
Rtn1Q8K0T0 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rtn1Q8K0T0 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rtn1Q8K0T0 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC15.3■□□□□ 0.04
Rtn1Q8K0T0 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC15.3■□□□□ 0.04
Rtn1Q8K0T0 Gm42928-201ENSMUST00000197338 3339 ntBASIC15.3■□□□□ 0.04
Rtn1Q8K0T0 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC15.3■□□□□ 0.04
Rtn1Q8K0T0 Gm44985-201ENSMUST00000206202 1016 ntBASIC15.3■□□□□ 0.04
Rtn1Q8K0T0 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rtn1Q8K0T0 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Rtn1Q8K0T0 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rtn1Q8K0T0 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rtn1Q8K0T0 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rtn1Q8K0T0 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Rtn1Q8K0T0 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Rtn1Q8K0T0 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Rtn1Q8K0T0 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rtn1Q8K0T0 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Rtn1Q8K0T0 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rtn1Q8K0T0 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rtn1Q8K0T0 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rtn1Q8K0T0 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rtn1Q8K0T0 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Rtn1Q8K0T0 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC15.3■□□□□ 0.04
Rtn1Q8K0T0 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rtn1Q8K0T0 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Rtn1Q8K0T0 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rtn1Q8K0T0 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rtn1Q8K0T0 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rtn1Q8K0T0 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rtn1Q8K0T0 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Rtn1Q8K0T0 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rtn1Q8K0T0 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rtn1Q8K0T0 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rtn1Q8K0T0 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Rtn1Q8K0T0 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rtn1Q8K0T0 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rtn1Q8K0T0 Gm15806-201ENSMUST00000120696 955 ntBASIC15.29■□□□□ 0.04
Rtn1Q8K0T0 Gm11424-201ENSMUST00000121929 829 ntBASIC15.29■□□□□ 0.04
Rtn1Q8K0T0 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rtn1Q8K0T0 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rtn1Q8K0T0 Gm44064-201ENSMUST00000204964 1087 ntBASIC15.29■□□□□ 0.04
Rtn1Q8K0T0 Gm8598-201ENSMUST00000221184 836 ntBASIC15.29■□□□□ 0.04
Rtn1Q8K0T0 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rtn1Q8K0T0 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC15.29■□□□□ 0.04
Rtn1Q8K0T0 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rtn1Q8K0T0 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rtn1Q8K0T0 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rtn1Q8K0T0 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rtn1Q8K0T0 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rtn1Q8K0T0 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC15.28■□□□□ 0.04
Rtn1Q8K0T0 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC15.28■□□□□ 0.04
Rtn1Q8K0T0 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rtn1Q8K0T0 Gm15544-201ENSMUST00000118776 1531 ntBASIC15.28■□□□□ 0.04
Rtn1Q8K0T0 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rtn1Q8K0T0 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC15.28■□□□□ 0.04
Rtn1Q8K0T0 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rtn1Q8K0T0 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Rtn1Q8K0T0 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rtn1Q8K0T0 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rtn1Q8K0T0 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rtn1Q8K0T0 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rtn1Q8K0T0 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rtn1Q8K0T0 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rtn1Q8K0T0 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rtn1Q8K0T0 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC15.28■□□□□ 0.04
Rtn1Q8K0T0 Gm9002-201ENSMUST00000178437 499 ntBASIC15.28■□□□□ 0.04
Rtn1Q8K0T0 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC15.28■□□□□ 0.04
Rtn1Q8K0T0 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rtn1Q8K0T0 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
Rtn1Q8K0T0 Gm18041-201ENSMUST00000218210 618 ntBASIC15.28■□□□□ 0.04
Rtn1Q8K0T0 AC140375.2-201ENSMUST00000225283 584 ntBASIC15.28■□□□□ 0.04
Rtn1Q8K0T0 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rtn1Q8K0T0 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rtn1Q8K0T0 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rtn1Q8K0T0 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rtn1Q8K0T0 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rtn1Q8K0T0 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Rtn1Q8K0T0 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rtn1Q8K0T0 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Rtn1Q8K0T0 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
Rtn1Q8K0T0 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rtn1Q8K0T0 Gm43423-201ENSMUST00000198390 2094 ntBASIC15.28■□□□□ 0.04
Rtn1Q8K0T0 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rtn1Q8K0T0 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rtn1Q8K0T0 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Rtn1Q8K0T0 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rtn1Q8K0T0 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rtn1Q8K0T0 Gm9816-201ENSMUST00000122292 1414 ntBASIC15.27■□□□□ 0.04
Rtn1Q8K0T0 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rtn1Q8K0T0 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms