Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm5466-201ENSMUST00000119395 1890 ntBASIC14.69□□□□□ -0.06
Trim47Q8C0E3 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim47Q8C0E3 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim47Q8C0E3 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim47Q8C0E3 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim47Q8C0E3 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim47Q8C0E3 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim47Q8C0E3 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Trim47Q8C0E3 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim47Q8C0E3 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim47Q8C0E3 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim47Q8C0E3 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim47Q8C0E3 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Trim47Q8C0E3 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim47Q8C0E3 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim47Q8C0E3 Grk6-205ENSMUST00000224653 2976 ntBASIC14.69□□□□□ -0.06
Trim47Q8C0E3 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trim47Q8C0E3 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Trim47Q8C0E3 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC14.69□□□□□ -0.06
Trim47Q8C0E3 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC14.69□□□□□ -0.06
Trim47Q8C0E3 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC14.69□□□□□ -0.06
Trim47Q8C0E3 AC122305.4-201ENSMUST00000216159 1206 ntBASIC14.69□□□□□ -0.06
Trim47Q8C0E3 Gm2824-203ENSMUST00000226189 1228 ntBASIC14.69□□□□□ -0.06
Trim47Q8C0E3 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trim47Q8C0E3 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Trim47Q8C0E3 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trim47Q8C0E3 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim47Q8C0E3 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trim47Q8C0E3 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim47Q8C0E3 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim47Q8C0E3 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim47Q8C0E3 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Trim47Q8C0E3 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim47Q8C0E3 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim47Q8C0E3 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC14.68□□□□□ -0.06
Trim47Q8C0E3 Gm7553-201ENSMUST00000185805 1426 ntBASIC14.68□□□□□ -0.06
Trim47Q8C0E3 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim47Q8C0E3 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim47Q8C0E3 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC14.68□□□□□ -0.06
Trim47Q8C0E3 Gm12384-201ENSMUST00000119228 919 ntBASIC14.68□□□□□ -0.06
Trim47Q8C0E3 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trim47Q8C0E3 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC14.68□□□□□ -0.06
Trim47Q8C0E3 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trim47Q8C0E3 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trim47Q8C0E3 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC14.68□□□□□ -0.06
Trim47Q8C0E3 Gm44044-201ENSMUST00000205178 1089 ntBASIC14.68□□□□□ -0.06
Trim47Q8C0E3 AC132260.2-201ENSMUST00000224482 344 ntBASIC14.68□□□□□ -0.06
Trim47Q8C0E3 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim47Q8C0E3 Gm10146-201ENSMUST00000072739 309 ntBASIC14.68□□□□□ -0.06
Trim47Q8C0E3 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim47Q8C0E3 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim47Q8C0E3 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Trim47Q8C0E3 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim47Q8C0E3 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim47Q8C0E3 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim47Q8C0E3 Gm5989-201ENSMUST00000096092 2077 ntBASIC14.68□□□□□ -0.06
Trim47Q8C0E3 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
Trim47Q8C0E3 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC14.68□□□□□ -0.06
Trim47Q8C0E3 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trim47Q8C0E3 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim47Q8C0E3 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim47Q8C0E3 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim47Q8C0E3 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim47Q8C0E3 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim47Q8C0E3 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trim47Q8C0E3 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim47Q8C0E3 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC14.67□□□□□ -0.06
Trim47Q8C0E3 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim47Q8C0E3 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim47Q8C0E3 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC14.67□□□□□ -0.06
Trim47Q8C0E3 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim47Q8C0E3 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
Trim47Q8C0E3 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim47Q8C0E3 Gm8565-201ENSMUST00000183259 1014 ntBASIC14.67□□□□□ -0.06
Trim47Q8C0E3 Gm27682-201ENSMUST00000183930 110 ntBASIC14.67□□□□□ -0.06
Trim47Q8C0E3 Gm8369-204ENSMUST00000188633 1227 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
Trim47Q8C0E3 Gm44985-201ENSMUST00000206202 1016 ntBASIC14.67□□□□□ -0.06
Trim47Q8C0E3 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC14.67□□□□□ -0.06
Trim47Q8C0E3 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trim47Q8C0E3 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim47Q8C0E3 Pcgf5-211ENSMUST00000225920 6443 ntBASIC14.67□□□□□ -0.06
Trim47Q8C0E3 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim47Q8C0E3 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim47Q8C0E3 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim47Q8C0E3 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim47Q8C0E3 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim47Q8C0E3 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim47Q8C0E3 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim47Q8C0E3 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.67□□□□□ -0.06
Trim47Q8C0E3 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim47Q8C0E3 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trim47Q8C0E3 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Trim47Q8C0E3 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim47Q8C0E3 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC14.66□□□□□ -0.06
Trim47Q8C0E3 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim47Q8C0E3 Dctn4-202ENSMUST00000223590 1530 ntBASIC14.66□□□□□ -0.06
Trim47Q8C0E3 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Trim47Q8C0E3 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim47Q8C0E3 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Trim47Q8C0E3 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms