Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col16a1Q8BLX7 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col16a1Q8BLX7 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col16a1Q8BLX7 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC17.05■□□□□ 0.32
Col16a1Q8BLX7 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col16a1Q8BLX7 Gm8798-201ENSMUST00000211877 1661 ntBASIC17.05■□□□□ 0.32
Col16a1Q8BLX7 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col16a1Q8BLX7 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Col16a1Q8BLX7 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col16a1Q8BLX7 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC17.05■□□□□ 0.32
Col16a1Q8BLX7 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Col16a1Q8BLX7 Gm13315-201ENSMUST00000120376 991 ntBASIC17.05■□□□□ 0.32
Col16a1Q8BLX7 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC17.05■□□□□ 0.32
Col16a1Q8BLX7 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC17.05■□□□□ 0.32
Col16a1Q8BLX7 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col16a1Q8BLX7 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col16a1Q8BLX7 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col16a1Q8BLX7 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Col16a1Q8BLX7 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col16a1Q8BLX7 Gm5639-201ENSMUST00000122305 2403 ntBASIC17.05■□□□□ 0.32
Col16a1Q8BLX7 Gm43823-201ENSMUST00000197391 1808 ntBASIC17.05■□□□□ 0.32
Col16a1Q8BLX7 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Col16a1Q8BLX7 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col16a1Q8BLX7 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Col16a1Q8BLX7 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col16a1Q8BLX7 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col16a1Q8BLX7 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col16a1Q8BLX7 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col16a1Q8BLX7 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Col16a1Q8BLX7 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col16a1Q8BLX7 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col16a1Q8BLX7 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC17.04■□□□□ 0.32
Col16a1Q8BLX7 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
Col16a1Q8BLX7 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Col16a1Q8BLX7 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col16a1Q8BLX7 Gm12266-201ENSMUST00000120311 962 ntBASIC17.04■□□□□ 0.32
Col16a1Q8BLX7 Gm11597-201ENSMUST00000121423 964 ntBASIC17.04■□□□□ 0.32
Col16a1Q8BLX7 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC17.04■□□□□ 0.32
Col16a1Q8BLX7 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col16a1Q8BLX7 Gm17812-201ENSMUST00000204935 318 ntBASIC17.04■□□□□ 0.32
Col16a1Q8BLX7 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC17.04■□□□□ 0.32
Col16a1Q8BLX7 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Col16a1Q8BLX7 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col16a1Q8BLX7 AC154276.3-201ENSMUST00000227643 998 ntBASIC17.04■□□□□ 0.32
Col16a1Q8BLX7 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC17.04■□□□□ 0.32
Col16a1Q8BLX7 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col16a1Q8BLX7 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col16a1Q8BLX7 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col16a1Q8BLX7 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col16a1Q8BLX7 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col16a1Q8BLX7 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col16a1Q8BLX7 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col16a1Q8BLX7 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Col16a1Q8BLX7 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Col16a1Q8BLX7 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Col16a1Q8BLX7 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
Col16a1Q8BLX7 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Col16a1Q8BLX7 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
Col16a1Q8BLX7 Gm13408-201ENSMUST00000119822 798 ntBASIC17.03■□□□□ 0.32
Col16a1Q8BLX7 Gm13813-201ENSMUST00000120998 787 ntBASIC17.03■□□□□ 0.32
Col16a1Q8BLX7 Gm13935-201ENSMUST00000121859 798 ntBASIC17.03■□□□□ 0.32
Col16a1Q8BLX7 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC17.03■□□□□ 0.32
Col16a1Q8BLX7 Gm32999-201ENSMUST00000192693 562 ntBASIC17.03■□□□□ 0.32
Col16a1Q8BLX7 Gm18730-201ENSMUST00000218038 343 ntBASIC17.03■□□□□ 0.32
Col16a1Q8BLX7 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Col16a1Q8BLX7 Gm10312-201ENSMUST00000078515 489 ntBASIC17.03■□□□□ 0.32
Col16a1Q8BLX7 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col16a1Q8BLX7 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col16a1Q8BLX7 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col16a1Q8BLX7 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Col16a1Q8BLX7 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col16a1Q8BLX7 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Col16a1Q8BLX7 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Col16a1Q8BLX7 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col16a1Q8BLX7 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC17.03■□□□□ 0.32
Col16a1Q8BLX7 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col16a1Q8BLX7 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col16a1Q8BLX7 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col16a1Q8BLX7 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Col16a1Q8BLX7 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.03■□□□□ 0.32
Col16a1Q8BLX7 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col16a1Q8BLX7 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col16a1Q8BLX7 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC17.02■□□□□ 0.32
Col16a1Q8BLX7 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col16a1Q8BLX7 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
Col16a1Q8BLX7 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Col16a1Q8BLX7 Gm19187-201ENSMUST00000206781 892 ntBASIC17.02■□□□□ 0.32
Col16a1Q8BLX7 Gm5369-201ENSMUST00000217499 588 ntBASIC17.02■□□□□ 0.32
Col16a1Q8BLX7 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col16a1Q8BLX7 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col16a1Q8BLX7 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Col16a1Q8BLX7 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col16a1Q8BLX7 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col16a1Q8BLX7 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Col16a1Q8BLX7 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC17.02■□□□□ 0.32
Col16a1Q8BLX7 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC17.02■□□□□ 0.32
Col16a1Q8BLX7 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col16a1Q8BLX7 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC17.02■□□□□ 0.32
Col16a1Q8BLX7 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col16a1Q8BLX7 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms