Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Trim40Q3UWA4 H2af-ps-201ENSMUST00000119066 295 ntBASIC12.42□□□□□ -0.42
Trim40Q3UWA4 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC12.42□□□□□ -0.42
Trim40Q3UWA4 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim40Q3UWA4 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trim40Q3UWA4 Gm18889-201ENSMUST00000174284 929 ntBASIC12.42□□□□□ -0.42
Trim40Q3UWA4 Gm9824-201ENSMUST00000178707 561 ntBASIC12.42□□□□□ -0.42
Trim40Q3UWA4 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trim40Q3UWA4 Ndufaf2-202ENSMUST00000223734 556 ntBASIC12.42□□□□□ -0.42
Trim40Q3UWA4 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim40Q3UWA4 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Trim40Q3UWA4 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim40Q3UWA4 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim40Q3UWA4 Gm15500-202ENSMUST00000071641 1019 ntBASIC12.42□□□□□ -0.42
Trim40Q3UWA4 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim40Q3UWA4 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim40Q3UWA4 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim40Q3UWA4 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim40Q3UWA4 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim40Q3UWA4 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim40Q3UWA4 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC12.42□□□□□ -0.42
Trim40Q3UWA4 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim40Q3UWA4 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim40Q3UWA4 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim40Q3UWA4 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.42□□□□□ -0.42
Trim40Q3UWA4 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trim40Q3UWA4 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim40Q3UWA4 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim40Q3UWA4 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim40Q3UWA4 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim40Q3UWA4 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Trim40Q3UWA4 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim40Q3UWA4 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim40Q3UWA4 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim40Q3UWA4 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim40Q3UWA4 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC12.41□□□□□ -0.42
Trim40Q3UWA4 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.41□□□□□ -0.42
Trim40Q3UWA4 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim40Q3UWA4 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim40Q3UWA4 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim40Q3UWA4 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim40Q3UWA4 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.41□□□□□ -0.42
Trim40Q3UWA4 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim40Q3UWA4 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim40Q3UWA4 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim40Q3UWA4 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim40Q3UWA4 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Trim40Q3UWA4 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim40Q3UWA4 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC12.41□□□□□ -0.42
Trim40Q3UWA4 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim40Q3UWA4 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC12.41□□□□□ -0.42
Trim40Q3UWA4 Gm8000-201ENSMUST00000188378 592 ntBASIC12.41□□□□□ -0.42
Trim40Q3UWA4 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim40Q3UWA4 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC12.41□□□□□ -0.42
Trim40Q3UWA4 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim40Q3UWA4 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim40Q3UWA4 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim40Q3UWA4 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim40Q3UWA4 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim40Q3UWA4 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim40Q3UWA4 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Trim40Q3UWA4 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim40Q3UWA4 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim40Q3UWA4 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim40Q3UWA4 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim40Q3UWA4 Gm13332-201ENSMUST00000120451 1398 ntBASIC12.41□□□□□ -0.42
Trim40Q3UWA4 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim40Q3UWA4 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim40Q3UWA4 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim40Q3UWA4 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim40Q3UWA4 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim40Q3UWA4 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim40Q3UWA4 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim40Q3UWA4 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim40Q3UWA4 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim40Q3UWA4 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim40Q3UWA4 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trim40Q3UWA4 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trim40Q3UWA4 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim40Q3UWA4 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC12.4□□□□□ -0.42
Trim40Q3UWA4 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC12.4□□□□□ -0.42
Trim40Q3UWA4 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC12.4□□□□□ -0.42
Trim40Q3UWA4 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC12.4□□□□□ -0.42
Trim40Q3UWA4 Mir7221-201ENSMUST00000184009 72 ntBASIC12.4□□□□□ -0.42
Trim40Q3UWA4 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trim40Q3UWA4 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.4□□□□□ -0.42
Trim40Q3UWA4 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC12.4□□□□□ -0.42
Trim40Q3UWA4 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
Trim40Q3UWA4 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.4□□□□□ -0.42
Trim40Q3UWA4 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim40Q3UWA4 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim40Q3UWA4 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim40Q3UWA4 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim40Q3UWA4 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim40Q3UWA4 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.4□□□□□ -0.42
Trim40Q3UWA4 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.4□□□□□ -0.42
Trim40Q3UWA4 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Trim40Q3UWA4 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.4□□□□□ -0.42
Trim40Q3UWA4 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim40Q3UWA4 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 105.7 ms