Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Fndc4Q3TR08 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC11.32□□□□□ -0.6
Fndc4Q3TR08 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Fndc4Q3TR08 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Fndc4Q3TR08 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Fndc4Q3TR08 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Fndc4Q3TR08 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Fndc4Q3TR08 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Fndc4Q3TR08 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.31□□□□□ -0.6
Fndc4Q3TR08 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Fndc4Q3TR08 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Fndc4Q3TR08 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Fndc4Q3TR08 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Fndc4Q3TR08 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Fndc4Q3TR08 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Fndc4Q3TR08 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Fndc4Q3TR08 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Fndc4Q3TR08 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Fndc4Q3TR08 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Fndc4Q3TR08 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Fndc4Q3TR08 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC11.31□□□□□ -0.6
Fndc4Q3TR08 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Fndc4Q3TR08 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Fndc4Q3TR08 Gm3436-201ENSMUST00000179930 840 ntBASIC11.31□□□□□ -0.6
Fndc4Q3TR08 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Fndc4Q3TR08 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC11.31□□□□□ -0.6
Fndc4Q3TR08 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Fndc4Q3TR08 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Fndc4Q3TR08 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Fndc4Q3TR08 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Fndc4Q3TR08 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Fndc4Q3TR08 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Fndc4Q3TR08 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Fndc4Q3TR08 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Fndc4Q3TR08 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC11.31□□□□□ -0.6
Fndc4Q3TR08 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Fndc4Q3TR08 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Fndc4Q3TR08 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Fndc4Q3TR08 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Fndc4Q3TR08 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Fndc4Q3TR08 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Fndc4Q3TR08 Gm8337-201ENSMUST00000187358 1938 ntBASIC11.31□□□□□ -0.6
Fndc4Q3TR08 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Fndc4Q3TR08 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Fndc4Q3TR08 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Fndc4Q3TR08 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Fndc4Q3TR08 Matn2-203ENSMUST00000226766 3252 ntBASIC11.31□□□□□ -0.6
Fndc4Q3TR08 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC11.31□□□□□ -0.6
Fndc4Q3TR08 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Fndc4Q3TR08 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fndc4Q3TR08 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fndc4Q3TR08 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Fndc4Q3TR08 Gm17435-202ENSMUST00000212699 1998 ntBASIC11.3□□□□□ -0.6
Fndc4Q3TR08 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Fndc4Q3TR08 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fndc4Q3TR08 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fndc4Q3TR08 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fndc4Q3TR08 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Fndc4Q3TR08 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fndc4Q3TR08 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Fndc4Q3TR08 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fndc4Q3TR08 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
Fndc4Q3TR08 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fndc4Q3TR08 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fndc4Q3TR08 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Fndc4Q3TR08 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Fndc4Q3TR08 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Fndc4Q3TR08 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Fndc4Q3TR08 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
Fndc4Q3TR08 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fndc4Q3TR08 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fndc4Q3TR08 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC11.3□□□□□ -0.6
Fndc4Q3TR08 Gm15460-201ENSMUST00000118147 391 ntBASIC11.3□□□□□ -0.6
Fndc4Q3TR08 Gm7820-201ENSMUST00000121012 1052 ntBASIC11.3□□□□□ -0.6
Fndc4Q3TR08 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Fndc4Q3TR08 AC159114.1-201ENSMUST00000220349 266 ntBASIC11.3□□□□□ -0.6
Fndc4Q3TR08 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fndc4Q3TR08 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fndc4Q3TR08 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fndc4Q3TR08 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Fndc4Q3TR08 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Fndc4Q3TR08 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fndc4Q3TR08 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fndc4Q3TR08 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fndc4Q3TR08 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fndc4Q3TR08 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fndc4Q3TR08 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fndc4Q3TR08 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Fndc4Q3TR08 Gm13730-201ENSMUST00000121036 1462 ntBASIC11.3□□□□□ -0.6
Fndc4Q3TR08 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fndc4Q3TR08 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Fndc4Q3TR08 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC11.3□□□□□ -0.6
Fndc4Q3TR08 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Fndc4Q3TR08 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fndc4Q3TR08 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC11.29□□□□□ -0.6
Fndc4Q3TR08 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fndc4Q3TR08 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fndc4Q3TR08 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Fndc4Q3TR08 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Fndc4Q3TR08 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms