Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trim63Q38HM4 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trim63Q38HM4 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trim63Q38HM4 Gm20760-201ENSMUST00000179197 648 ntBASIC10.86□□□□□ -0.67
Trim63Q38HM4 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC10.86□□□□□ -0.67
Trim63Q38HM4 AC125350.1-201ENSMUST00000225115 903 ntBASIC10.86□□□□□ -0.67
Trim63Q38HM4 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trim63Q38HM4 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trim63Q38HM4 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trim63Q38HM4 Gm27177-202ENSMUST00000183514 2703 ntBASIC10.86□□□□□ -0.67
Trim63Q38HM4 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trim63Q38HM4 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trim63Q38HM4 Slc7a1-201ENSMUST00000048116 7179 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trim63Q38HM4 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC10.86□□□□□ -0.67
Trim63Q38HM4 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Trim63Q38HM4 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC10.86□□□□□ -0.67
Trim63Q38HM4 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Trim63Q38HM4 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trim63Q38HM4 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC10.86□□□□□ -0.67
Trim63Q38HM4 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trim63Q38HM4 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC10.86□□□□□ -0.67
Trim63Q38HM4 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trim63Q38HM4 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trim63Q38HM4 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Trim63Q38HM4 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trim63Q38HM4 Gm43727-201ENSMUST00000198021 2647 ntBASIC10.86□□□□□ -0.67
Trim63Q38HM4 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Trim63Q38HM4 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trim63Q38HM4 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Trim63Q38HM4 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trim63Q38HM4 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trim63Q38HM4 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trim63Q38HM4 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Trim63Q38HM4 Gm9109-201ENSMUST00000120254 1405 ntBASIC10.85□□□□□ -0.67
Trim63Q38HM4 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trim63Q38HM4 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trim63Q38HM4 Myh9-201ENSMUST00000016771 7433 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trim63Q38HM4 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC10.85□□□□□ -0.67
Trim63Q38HM4 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trim63Q38HM4 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trim63Q38HM4 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trim63Q38HM4 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trim63Q38HM4 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Trim63Q38HM4 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trim63Q38HM4 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trim63Q38HM4 Mir5122-201ENSMUST00000175004 89 ntBASIC10.85□□□□□ -0.67
Trim63Q38HM4 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC10.85□□□□□ -0.67
Trim63Q38HM4 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC10.85□□□□□ -0.67
Trim63Q38HM4 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trim63Q38HM4 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Trim63Q38HM4 Arhgef33-211ENSMUST00000225658 473 ntBASIC10.85□□□□□ -0.67
Trim63Q38HM4 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trim63Q38HM4 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trim63Q38HM4 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Trim63Q38HM4 AC153506.1-201ENSMUST00000218768 2915 ntBASIC10.85□□□□□ -0.67
Trim63Q38HM4 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC10.85□□□□□ -0.67
Trim63Q38HM4 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trim63Q38HM4 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC10.85□□□□□ -0.67
Trim63Q38HM4 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trim63Q38HM4 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trim63Q38HM4 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trim63Q38HM4 Gm37391-201ENSMUST00000194891 2318 ntBASIC10.85□□□□□ -0.67
Trim63Q38HM4 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trim63Q38HM4 Tcf21-202ENSMUST00000218002 1788 ntBASIC10.85□□□□□ -0.67
Trim63Q38HM4 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trim63Q38HM4 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trim63Q38HM4 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Trim63Q38HM4 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trim63Q38HM4 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Trim63Q38HM4 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
Trim63Q38HM4 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Trim63Q38HM4 Slc1a2-202ENSMUST00000080210 11595 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trim63Q38HM4 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trim63Q38HM4 AC122811.1-201ENSMUST00000222257 2921 ntBASIC10.85□□□□□ -0.67
Trim63Q38HM4 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trim63Q38HM4 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Trim63Q38HM4 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC10.84□□□□□ -0.67
Trim63Q38HM4 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Trim63Q38HM4 Gm42863-201ENSMUST00000197875 2958 ntBASIC10.84□□□□□ -0.67
Trim63Q38HM4 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Trim63Q38HM4 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC10.84□□□□□ -0.67
Trim63Q38HM4 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trim63Q38HM4 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
Trim63Q38HM4 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trim63Q38HM4 Gm28635-201ENSMUST00000189772 4734 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Trim63Q38HM4 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trim63Q38HM4 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trim63Q38HM4 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Trim63Q38HM4 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trim63Q38HM4 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trim63Q38HM4 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC10.84□□□□□ -0.67
Trim63Q38HM4 Gm6944-201ENSMUST00000182449 1006 ntBASIC10.84□□□□□ -0.67
Trim63Q38HM4 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Trim63Q38HM4 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trim63Q38HM4 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC10.84□□□□□ -0.67
Trim63Q38HM4 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trim63Q38HM4 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trim63Q38HM4 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trim63Q38HM4 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC10.84□□□□□ -0.67
Trim63Q38HM4 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 101 ms