Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col10a1Q05306 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.24□□□□□ -0.45
Col10a1Q05306 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.24□□□□□ -0.45
Col10a1Q05306 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col10a1Q05306 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Col10a1Q05306 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.23□□□□□ -0.45
Col10a1Q05306 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col10a1Q05306 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col10a1Q05306 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.23□□□□□ -0.45
Col10a1Q05306 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.23□□□□□ -0.45
Col10a1Q05306 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col10a1Q05306 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Col10a1Q05306 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col10a1Q05306 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col10a1Q05306 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.23□□□□□ -0.45
Col10a1Q05306 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col10a1Q05306 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col10a1Q05306 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col10a1Q05306 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Col10a1Q05306 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Col10a1Q05306 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col10a1Q05306 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Col10a1Q05306 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.23□□□□□ -0.45
Col10a1Q05306 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col10a1Q05306 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.23□□□□□ -0.45
Col10a1Q05306 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC12.23□□□□□ -0.45
Col10a1Q05306 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.23□□□□□ -0.45
Col10a1Q05306 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col10a1Q05306 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col10a1Q05306 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Col10a1Q05306 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col10a1Q05306 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col10a1Q05306 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col10a1Q05306 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.23□□□□□ -0.45
Col10a1Q05306 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col10a1Q05306 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Col10a1Q05306 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
Col10a1Q05306 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.23□□□□□ -0.45
Col10a1Q05306 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Col10a1Q05306 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col10a1Q05306 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col10a1Q05306 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col10a1Q05306 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col10a1Q05306 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col10a1Q05306 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.22□□□□□ -0.45
Col10a1Q05306 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.22□□□□□ -0.45
Col10a1Q05306 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col10a1Q05306 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Col10a1Q05306 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col10a1Q05306 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Col10a1Q05306 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Col10a1Q05306 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col10a1Q05306 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.22□□□□□ -0.45
Col10a1Q05306 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Col10a1Q05306 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.22□□□□□ -0.45
Col10a1Q05306 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Col10a1Q05306 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col10a1Q05306 Gm11478-201ENSMUST00000117851 599 ntBASIC12.22□□□□□ -0.45
Col10a1Q05306 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col10a1Q05306 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Col10a1Q05306 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col10a1Q05306 Gm6152-201ENSMUST00000151704 340 ntBASIC12.22□□□□□ -0.45
Col10a1Q05306 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col10a1Q05306 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Col10a1Q05306 Gm38671-201ENSMUST00000200573 130 ntBASIC12.22□□□□□ -0.45
Col10a1Q05306 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.22□□□□□ -0.45
Col10a1Q05306 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Col10a1Q05306 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col10a1Q05306 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col10a1Q05306 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col10a1Q05306 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col10a1Q05306 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Col10a1Q05306 Gm5356-201ENSMUST00000093326 615 ntBASIC12.22□□□□□ -0.45
Col10a1Q05306 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Col10a1Q05306 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col10a1Q05306 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col10a1Q05306 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col10a1Q05306 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Col10a1Q05306 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Col10a1Q05306 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col10a1Q05306 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Col10a1Q05306 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col10a1Q05306 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.22□□□□□ -0.45
Col10a1Q05306 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col10a1Q05306 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col10a1Q05306 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Col10a1Q05306 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Col10a1Q05306 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.21□□□□□ -0.45
Col10a1Q05306 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col10a1Q05306 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Col10a1Q05306 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col10a1Q05306 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col10a1Q05306 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Col10a1Q05306 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col10a1Q05306 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Col10a1Q05306 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col10a1Q05306 Gm15163-201ENSMUST00000120749 1302 ntBASIC12.21□□□□□ -0.45
Col10a1Q05306 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col10a1Q05306 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Col10a1Q05306 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms