Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC13.66□□□□□ -0.22
Sox9Q04887 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox9Q04887 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.66□□□□□ -0.22
Sox9Q04887 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.66□□□□□ -0.22
Sox9Q04887 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox9Q04887 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox9Q04887 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.65□□□□□ -0.22
Sox9Q04887 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sox9Q04887 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox9Q04887 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox9Q04887 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.65□□□□□ -0.22
Sox9Q04887 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox9Q04887 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox9Q04887 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Sox9Q04887 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sox9Q04887 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox9Q04887 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox9Q04887 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox9Q04887 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox9Q04887 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox9Q04887 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.65□□□□□ -0.22
Sox9Q04887 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Sox9Q04887 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sox9Q04887 Gm5070-201ENSMUST00000177599 862 ntBASIC13.65□□□□□ -0.22
Sox9Q04887 Gm25700-201ENSMUST00000177693 110 ntBASIC13.65□□□□□ -0.22
Sox9Q04887 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox9Q04887 AC122876.1-201ENSMUST00000217619 825 ntBASIC13.65□□□□□ -0.22
Sox9Q04887 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox9Q04887 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox9Q04887 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox9Q04887 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox9Q04887 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sox9Q04887 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC13.65□□□□□ -0.22
Sox9Q04887 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox9Q04887 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox9Q04887 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sox9Q04887 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sox9Q04887 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sox9Q04887 Gm4366-201ENSMUST00000201488 1342 ntBASIC13.64□□□□□ -0.23
Sox9Q04887 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
Sox9Q04887 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox9Q04887 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox9Q04887 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Sox9Q04887 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox9Q04887 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox9Q04887 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox9Q04887 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox9Q04887 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox9Q04887 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox9Q04887 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Sox9Q04887 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Sox9Q04887 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox9Q04887 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox9Q04887 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox9Q04887 Gm43081-201ENSMUST00000199082 1380 ntBASIC13.64□□□□□ -0.23
Sox9Q04887 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Sox9Q04887 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC13.64□□□□□ -0.23
Sox9Q04887 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Sox9Q04887 Gm11597-201ENSMUST00000121423 964 ntBASIC13.64□□□□□ -0.23
Sox9Q04887 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.64□□□□□ -0.23
Sox9Q04887 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC13.64□□□□□ -0.23
Sox9Q04887 Gm3096-201ENSMUST00000185770 364 ntBASIC13.64□□□□□ -0.23
Sox9Q04887 Gm8885-201ENSMUST00000189382 598 ntBASIC13.64□□□□□ -0.23
Sox9Q04887 Gm28693-202ENSMUST00000190758 331 ntBASIC13.64□□□□□ -0.23
Sox9Q04887 Gm44136-201ENSMUST00000203819 1106 ntBASIC13.64□□□□□ -0.23
Sox9Q04887 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Sox9Q04887 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Sox9Q04887 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Sox9Q04887 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox9Q04887 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox9Q04887 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Sox9Q04887 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.64□□□□□ -0.23
Sox9Q04887 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox9Q04887 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.64□□□□□ -0.23
Sox9Q04887 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox9Q04887 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox9Q04887 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
Sox9Q04887 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox9Q04887 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox9Q04887 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox9Q04887 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox9Q04887 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox9Q04887 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox9Q04887 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox9Q04887 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox9Q04887 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox9Q04887 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox9Q04887 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Sox9Q04887 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox9Q04887 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.63□□□□□ -0.23
Sox9Q04887 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox9Q04887 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox9Q04887 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox9Q04887 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox9Q04887 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox9Q04887 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Sox9Q04887 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox9Q04887 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Sox9Q04887 Gm16481-201ENSMUST00000119074 1227 ntBASIC13.63□□□□□ -0.23
Sox9Q04887 Gm15131-201ENSMUST00000119124 595 ntBASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms