Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pfdn6Q03958 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pfdn6Q03958 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pfdn6Q03958 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pfdn6Q03958 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pfdn6Q03958 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.27
Pfdn6Q03958 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pfdn6Q03958 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pfdn6Q03958 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pfdn6Q03958 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pfdn6Q03958 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pfdn6Q03958 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Pfdn6Q03958 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Pfdn6Q03958 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Pfdn6Q03958 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pfdn6Q03958 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pfdn6Q03958 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pfdn6Q03958 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pfdn6Q03958 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pfdn6Q03958 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pfdn6Q03958 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.33□□□□□ -0.28
Pfdn6Q03958 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pfdn6Q03958 Gm22189-201ENSMUST00000103822 86 ntBASIC13.33□□□□□ -0.28
Pfdn6Q03958 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pfdn6Q03958 Gm15371-201ENSMUST00000117057 784 ntBASIC13.33□□□□□ -0.28
Pfdn6Q03958 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pfdn6Q03958 Gm26464-201ENSMUST00000157094 305 ntBASIC13.33□□□□□ -0.28
Pfdn6Q03958 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.33□□□□□ -0.28
Pfdn6Q03958 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Pfdn6Q03958 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.33□□□□□ -0.28
Pfdn6Q03958 Gm7730-201ENSMUST00000212486 454 ntBASIC13.33□□□□□ -0.28
Pfdn6Q03958 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pfdn6Q03958 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Pfdn6Q03958 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Pfdn6Q03958 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pfdn6Q03958 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pfdn6Q03958 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pfdn6Q03958 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pfdn6Q03958 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pfdn6Q03958 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pfdn6Q03958 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
Pfdn6Q03958 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pfdn6Q03958 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pfdn6Q03958 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pfdn6Q03958 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.33□□□□□ -0.28
Pfdn6Q03958 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pfdn6Q03958 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pfdn6Q03958 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pfdn6Q03958 AC117194.1-201ENSMUST00000224847 3002 ntBASIC13.32□□□□□ -0.28
Pfdn6Q03958 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pfdn6Q03958 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pfdn6Q03958 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pfdn6Q03958 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pfdn6Q03958 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pfdn6Q03958 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pfdn6Q03958 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pfdn6Q03958 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pfdn6Q03958 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC13.32□□□□□ -0.28
Pfdn6Q03958 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pfdn6Q03958 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pfdn6Q03958 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.32□□□□□ -0.28
Pfdn6Q03958 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pfdn6Q03958 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13.32□□□□□ -0.28
Pfdn6Q03958 Gm42550-201ENSMUST00000201553 960 ntBASIC13.32□□□□□ -0.28
Pfdn6Q03958 AC124732.1-201ENSMUST00000221551 910 ntBASIC13.32□□□□□ -0.28
Pfdn6Q03958 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pfdn6Q03958 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pfdn6Q03958 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pfdn6Q03958 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pfdn6Q03958 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pfdn6Q03958 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pfdn6Q03958 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pfdn6Q03958 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pfdn6Q03958 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pfdn6Q03958 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pfdn6Q03958 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pfdn6Q03958 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pfdn6Q03958 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pfdn6Q03958 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pfdn6Q03958 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC13.32□□□□□ -0.28
Pfdn6Q03958 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pfdn6Q03958 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Pfdn6Q03958 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pfdn6Q03958 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pfdn6Q03958 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pfdn6Q03958 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.31□□□□□ -0.28
Pfdn6Q03958 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pfdn6Q03958 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pfdn6Q03958 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pfdn6Q03958 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
Pfdn6Q03958 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pfdn6Q03958 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pfdn6Q03958 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pfdn6Q03958 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pfdn6Q03958 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pfdn6Q03958 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pfdn6Q03958 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pfdn6Q03958 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pfdn6Q03958 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC13.31□□□□□ -0.28
Pfdn6Q03958 Gm15678-201ENSMUST00000117573 960 ntBASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms