Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC11.81□□□□□ -0.52
H3f3aP84244 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H3f3aP84244 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
H3f3aP84244 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
H3f3aP84244 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H3f3aP84244 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
H3f3aP84244 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H3f3aP84244 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H3f3aP84244 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H3f3aP84244 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC11.8□□□□□ -0.52
H3f3aP84244 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
H3f3aP84244 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
H3f3aP84244 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
H3f3aP84244 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
H3f3aP84244 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
H3f3aP84244 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
H3f3aP84244 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
H3f3aP84244 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
H3f3aP84244 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC11.8□□□□□ -0.52
H3f3aP84244 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
H3f3aP84244 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
H3f3aP84244 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
H3f3aP84244 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
H3f3aP84244 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
H3f3aP84244 Acot6-202ENSMUST00000222921 3622 ntBASIC11.8□□□□□ -0.52
H3f3aP84244 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
H3f3aP84244 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
H3f3aP84244 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC11.8□□□□□ -0.52
H3f3aP84244 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
H3f3aP84244 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
H3f3aP84244 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC11.8□□□□□ -0.52
H3f3aP84244 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC11.8□□□□□ -0.52
H3f3aP84244 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
H3f3aP84244 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
H3f3aP84244 Gm27892-201ENSMUST00000185017 106 ntBASIC11.8□□□□□ -0.52
H3f3aP84244 Gm42929-201ENSMUST00000198374 1286 ntBASIC11.8□□□□□ -0.52
H3f3aP84244 Gm10012-201ENSMUST00000078252 192 ntBASIC11.8□□□□□ -0.52
H3f3aP84244 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
H3f3aP84244 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
H3f3aP84244 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
H3f3aP84244 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
H3f3aP84244 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
H3f3aP84244 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
H3f3aP84244 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
H3f3aP84244 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
H3f3aP84244 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
H3f3aP84244 Gm18630-201ENSMUST00000222109 1397 ntBASIC11.79□□□□□ -0.52
H3f3aP84244 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
H3f3aP84244 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
H3f3aP84244 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC11.79□□□□□ -0.52
H3f3aP84244 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
H3f3aP84244 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
H3f3aP84244 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
H3f3aP84244 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
H3f3aP84244 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
H3f3aP84244 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC11.79□□□□□ -0.52
H3f3aP84244 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
H3f3aP84244 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
H3f3aP84244 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
H3f3aP84244 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
H3f3aP84244 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
H3f3aP84244 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
H3f3aP84244 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
H3f3aP84244 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
H3f3aP84244 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
H3f3aP84244 Mir874-201ENSMUST00000104769 76 ntBASIC11.79□□□□□ -0.52
H3f3aP84244 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
H3f3aP84244 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
H3f3aP84244 Gm5303-201ENSMUST00000117943 1252 ntBASIC11.79□□□□□ -0.52
H3f3aP84244 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC11.79□□□□□ -0.52
H3f3aP84244 Gm11424-201ENSMUST00000121929 829 ntBASIC11.79□□□□□ -0.52
H3f3aP84244 Gm6161-201ENSMUST00000121942 1102 ntBASIC11.79□□□□□ -0.52
H3f3aP84244 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC11.79□□□□□ -0.52
H3f3aP84244 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
H3f3aP84244 Gm6254-201ENSMUST00000168178 1072 ntBASIC11.79□□□□□ -0.52
H3f3aP84244 Gm6153-201ENSMUST00000172004 1058 ntBASIC11.79□□□□□ -0.52
H3f3aP84244 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
H3f3aP84244 Gm5641-202ENSMUST00000198699 1080 ntBASIC11.79□□□□□ -0.52
H3f3aP84244 Gm38671-201ENSMUST00000200573 130 ntBASIC11.79□□□□□ -0.52
H3f3aP84244 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC11.79□□□□□ -0.52
H3f3aP84244 Gm45242-201ENSMUST00000210666 2129 ntBASIC11.79□□□□□ -0.52
H3f3aP84244 CT573086.1-201ENSMUST00000227202 1074 ntBASIC11.79□□□□□ -0.52
H3f3aP84244 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
H3f3aP84244 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
H3f3aP84244 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
H3f3aP84244 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
H3f3aP84244 Gm5356-201ENSMUST00000093326 615 ntBASIC11.79□□□□□ -0.52
H3f3aP84244 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
H3f3aP84244 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
H3f3aP84244 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
H3f3aP84244 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
H3f3aP84244 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC11.79□□□□□ -0.52
H3f3aP84244 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
H3f3aP84244 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
H3f3aP84244 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
H3f3aP84244 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
H3f3aP84244 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
H3f3aP84244 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
H3f3aP84244 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
H3f3aP84244 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms