Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Gm24830-201ENSMUST00000102024 166 ntBASIC17.74■□□□□ 0.43
Nphp4P59240 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC17.74■□□□□ 0.43
Nphp4P59240 Gm25890-201ENSMUST00000177643 165 ntBASIC17.74■□□□□ 0.43
Nphp4P59240 Rnu1b2-201ENSMUST00000178073 165 ntBASIC17.74■□□□□ 0.43
Nphp4P59240 Rnu1b1-201ENSMUST00000178250 165 ntBASIC17.74■□□□□ 0.43
Nphp4P59240 Gm22614-201ENSMUST00000178300 165 ntBASIC17.74■□□□□ 0.43
Nphp4P59240 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC17.74■□□□□ 0.43
Nphp4P59240 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC17.74■□□□□ 0.43
Nphp4P59240 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Nphp4P59240 AC093022.1-201ENSMUST00000226949 1072 ntBASIC17.74■□□□□ 0.43
Nphp4P59240 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nphp4P59240 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nphp4P59240 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Nphp4P59240 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nphp4P59240 Gm22042-201ENSMUST00000082989 165 ntBASIC17.74■□□□□ 0.43
Nphp4P59240 Gm26232-201ENSMUST00000083360 166 ntBASIC17.74■□□□□ 0.43
Nphp4P59240 Gm24136-201ENSMUST00000083374 165 ntBASIC17.74■□□□□ 0.43
Nphp4P59240 Rnu1b6-201ENSMUST00000083839 166 ntBASIC17.74■□□□□ 0.43
Nphp4P59240 Gm26110-201ENSMUST00000083971 165 ntBASIC17.74■□□□□ 0.43
Nphp4P59240 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC17.74■□□□□ 0.43
Nphp4P59240 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Nphp4P59240 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC17.74■□□□□ 0.43
Nphp4P59240 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nphp4P59240 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nphp4P59240 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nphp4P59240 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nphp4P59240 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Nphp4P59240 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nphp4P59240 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Nphp4P59240 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Nphp4P59240 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nphp4P59240 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Nphp4P59240 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nphp4P59240 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC17.74■□□□□ 0.43
Nphp4P59240 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nphp4P59240 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Nphp4P59240 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nphp4P59240 Gm13813-201ENSMUST00000120998 787 ntBASIC17.73■□□□□ 0.43
Nphp4P59240 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC17.73■□□□□ 0.43
Nphp4P59240 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC17.73■□□□□ 0.43
Nphp4P59240 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nphp4P59240 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC17.73■□□□□ 0.43
Nphp4P59240 AA914427-201ENSMUST00000193194 1166 ntBASIC17.73■□□□□ 0.43
Nphp4P59240 Gm31256-201ENSMUST00000194705 506 ntBASIC17.73■□□□□ 0.43
Nphp4P59240 Gm38317-201ENSMUST00000195564 343 ntBASIC17.73■□□□□ 0.43
Nphp4P59240 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC17.73■□□□□ 0.43
Nphp4P59240 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC17.73■□□□□ 0.43
Nphp4P59240 Gm18615-201ENSMUST00000222919 1031 ntBASIC17.73■□□□□ 0.43
Nphp4P59240 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nphp4P59240 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nphp4P59240 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nphp4P59240 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Nphp4P59240 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nphp4P59240 AC137842.1-201ENSMUST00000227896 2064 ntBASIC17.73■□□□□ 0.43
Nphp4P59240 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nphp4P59240 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC17.73■□□□□ 0.43
Nphp4P59240 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nphp4P59240 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nphp4P59240 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC17.73■□□□□ 0.43
Nphp4P59240 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Nphp4P59240 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Nphp4P59240 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Nphp4P59240 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC17.72■□□□□ 0.43
Nphp4P59240 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Nphp4P59240 Gm12058-201ENSMUST00000118614 437 ntBASIC17.72■□□□□ 0.43
Nphp4P59240 Gm12012-201ENSMUST00000118857 1066 ntBASIC17.72■□□□□ 0.43
Nphp4P59240 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Nphp4P59240 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC17.72■□□□□ 0.43
Nphp4P59240 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC17.72■□□□□ 0.43
Nphp4P59240 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nphp4P59240 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nphp4P59240 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Nphp4P59240 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nphp4P59240 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC17.72■□□□□ 0.43
Nphp4P59240 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Nphp4P59240 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Nphp4P59240 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nphp4P59240 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nphp4P59240 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Nphp4P59240 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nphp4P59240 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nphp4P59240 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nphp4P59240 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nphp4P59240 Gm8862-201ENSMUST00000198379 1346 ntBASIC17.72■□□□□ 0.43
Nphp4P59240 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nphp4P59240 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nphp4P59240 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nphp4P59240 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Nphp4P59240 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Nphp4P59240 Gm26956-201ENSMUST00000182176 986 ntBASIC17.72■□□□□ 0.43
Nphp4P59240 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC17.72■□□□□ 0.43
Nphp4P59240 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC17.72■□□□□ 0.43
Nphp4P59240 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC17.72■□□□□ 0.43
Nphp4P59240 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
Nphp4P59240 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Nphp4P59240 AC108416.1-202ENSMUST00000228927 1201 ntBASIC17.72■□□□□ 0.43
Nphp4P59240 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Nphp4P59240 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nphp4P59240 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nphp4P59240 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms